RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TEX26Q8N6G2 289 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 CEP70Q8NHQ1 597 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ZCWPW1Q9H0M4 648 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 WDR41Q9HAD4 459 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 EFCAB1Q9HAE3 211 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TMEM248Q9NWD8 314 aa16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 G3BP2Q9UN86 482 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB2-231ENST00000435145 IGLV3-10A0A075B6K4 115 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 NEMP2A6NFY4 417 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 A8MT66 165 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SLC7A4O43246 635 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 CAPNS1P04632 268 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SLC2A3P11169 496 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 KCNA5P22460 613 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HUNKP57058 714 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 GALNT1Q10472 559 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 CSHL1Q14406 222 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PSMD5Q16401 504 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 FAM26DQ5JW98 314 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 AGAP9Q5VTM2 703 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 NXNQ6DKJ4 435 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HMCESQ96FZ2 354 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TSC22D3Q99576 134 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 DDX50Q9BQ39 737 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MRGBPQ9NV56 204 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 UTP6Q9NYH9 597 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MYO16Q9Y6X6 1858 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 B4GALT3O60512 393 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ADAMTS4O75173 837 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SMIM24O75264 130 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 BCAS2O75934 225 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 IPO13O94829 963 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 OAZ2O95190 189 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 RBP1P09455 135 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 OR4Q2P0C623 313 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ZCCHC18P0CG32 403 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PSMD8P48556 350 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 INHBCP55103 352 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MED21Q13503 144 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PCSK7Q16549 785 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 KDELC2Q7Z4H8 507 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 GABPB2Q8TAK5 448 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SGF29Q96ES7 293 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TSPAN17Q96FV3 270 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MARK4Q96L34 752 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 NDNQ99608 321 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 UNKQ9C0B0 810 aaKnown RBP16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MEAF6Q9HAF1 191 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 BCAP29Q9UHQ4 241 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PACSIN3Q9UKS6 424 aa16.19■□□□□ 0.18
HLA-DQB2-231ENST00000435145 J3KR12 359 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ACOT8O14734 319 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HAPLN1P10915 354 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PEX19P40855 299 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SLC26A3P40879 764 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ALDH1A3P47895 512 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MS4A2Q01362 244 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 FLOT2Q14254 428 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TRIM71Q2Q1W2 868 aaKnown RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SLC39A12Q504Y0 691 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SDCCAG8Q86SQ7 713 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TICAM1Q8IUC6 712 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 CILP2Q8IUL8 1156 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SCN4BQ8IWT1 228 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SPPL2BQ8TCT7 592 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 DLG3Q92796 817 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ZYG11BQ9C0D3 744 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MFSD1Q9H3U5 465 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SUDS3Q9H7L9 328 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 SPC25Q9HBM1 224 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 NT5MQ9NPB1 228 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 IL37Q9NZH6 218 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 RIMS3Q9UJD0 308 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 AP1G1O43747 822 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HNRNPLP14866 589 aaKnown RBP eCLIP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ME2P23368 584 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 CD86P42081 329 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TBX4P57082 545 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 DSC1Q08554 894 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ACAP2Q15057 778 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HECTD2Q5U5R9 776 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 MARC1Q5VT66 337 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 HMGCLL1Q8TB92 370 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ARRDC2Q8TBH0 407 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 ZNF483Q8TF39 744 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TRIB2Q92519 343 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PIDD1Q9HB75 910 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TNFRSF12AQ9NP84 129 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 DTNAQ9Y4J8 743 aa16.18■□□□□ 0.18
HLA-DQB2-231ENST00000435145 PRSS51A0A1B0GVH4 220 aa16.17■□□□□ 0.18
HLA-DQB2-231ENST00000435145 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms