RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SF3A2Q15428 464 aaKnown RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 DUOXA1Q1HG43 343 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 SETMARQ53H47 684 aaPredicted RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 SLC45A4Q5BKX6 768 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 TRIM61Q5EBN2 209 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 RALGPS1Q5JS13 557 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 ARMC12Q5T9G4 340 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 CEP76Q8TAP6 659 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 HTR3CQ8WXA8 447 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 QKIQ96PU8 341 aaKnown RBP eCLIP15.66■□□□□ 0.1
TREX1-201ENST00000433541 MYOCQ99972 504 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 HERPUD2Q9BSE4 406 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 WRAP53Q9BUR4 548 aaKnown RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 TMEM74BQ9NUR3 256 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 DKK3Q9UBP4 350 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 PILRBQ9UKJ0 227 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 TPX2Q9ULW0 747 aaKnown RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 PYCARDQ9ULZ3 195 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 PCDHB9Q9Y5E1 797 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 LRRK1Q38SD2 2015 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 PATE3B3GLJ2 98 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 F5H423 210 aaPredicted RBP15.65■□□□□ 0.1
TREX1-201ENST00000433541 BCAT2O15382 392 aaPredicted RBP15.65■□□□□ 0.1
TREX1-201ENST00000433541 TSPAN6O43657 245 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 LRP3O75074 770 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 SOCS5O75159 536 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 PRKCGP05129 697 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 IGHV4-34P06331 123 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 RBP3P10745 1247 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 PRLRP16471 622 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 CD27P26842 260 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 CXCR5P32302 372 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 CD86P42081 329 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 CCR5P51681 352 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 ATXN3P54252 364 aaPredicted RBP15.65■□□□□ 0.1
TREX1-201ENST00000433541 TAS2R38P59533 333 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 RPS21P63220 83 aaKnown RBP15.65■□□□□ 0.1
TREX1-201ENST00000433541 XRCC4Q13426 336 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 TEAD4Q15561 434 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 UGP2Q16851 508 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 FAM182AQ5T1J6 154 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 TCEAL6Q6IPX3 200 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 KIAA1161Q6NSJ0 714 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 PID1Q7Z2X4 250 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 HORMAD1Q86X24 394 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 NDUFAF2Q8N183 169 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 GPR161Q8N6U8 529 aaKnown RBP15.65■□□□□ 0.1
TREX1-201ENST00000433541 TCEAL3Q969E4 200 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 SERAC1Q96JX3 654 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 IL12RB2Q99665 862 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 CARD9Q9H257 536 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 C10orf88Q9H8K7 445 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 GGT7Q9UJ14 662 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 FADS3Q9Y5Q0 445 aa15.65■□□□□ 0.1
TREX1-201ENST00000433541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.65■□□□□ 0.1
TREX1-201ENST00000433541 A0A1B0GTW7 788 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 A0A1W2PPC4 97 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 A0A1W2PQ67 120 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 A8MX80 341 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 PRR5-ARHGAP8B1AHC4 643 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 SLC31A1O15431 190 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 KCNN4O15554 427 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 AP1G1O43747 822 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 CEP104O60308 925 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 TIMP2P16035 220 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 CR2P20023 1033 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 PTPRZ1P23471 2315 aaPredicted RBP15.64■□□□□ 0.09
TREX1-201ENST00000433541 PTPN3P26045 913 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 RBL1P28749 1068 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 HOXD12P35452 270 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 SUOXP51687 545 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 SEMG2Q02383 582 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 TRAF2Q12933 501 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 CSRP2Q16527 193 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 PCSK7Q16549 785 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 NEK5Q6P3R8 708 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 PRR23CQ6ZRP0 262 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 TRIM69Q86WT6 500 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 HCAR2Q8TDS4 363 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 DNASE2BQ8WZ79 361 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 FAM131CQ96AQ9 280 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.09
TREX1-201ENST00000433541 GTPBP2Q9BX10 602 aaKnown RBP15.64■□□□□ 0.09
TREX1-201ENST00000433541 PCDH12Q9NPG4 1184 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 ATP8A1Q9Y2Q0 1164 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 JRKLQ9Y4A0 524 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 RAI2Q9Y5P3 530 aa15.64■□□□□ 0.09
TREX1-201ENST00000433541 USP27XA6NNY8 438 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 FOXD2O60548 495 aaPredicted RBP15.63■□□□□ 0.09
TREX1-201ENST00000433541 ZNF806P0C7X5 589 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 ITIH2P19823 946 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 AKT2P31751 481 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 AFF3P51826 1226 aaKnown RBP15.63■□□□□ 0.09
TREX1-201ENST00000433541 C21orf59P57076 290 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 TEX44Q53QW1 395 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 SEL1L3Q68CR1 1132 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 DENND2CQ68D51 928 aa15.63■□□□□ 0.09
TREX1-201ENST00000433541 KDELC2Q7Z4H8 507 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms