RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 OR2AP1Q8NGE2 309 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 UHMK1Q8TAS1 419 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 PTCD2Q8WV60 388 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 CFAP36Q96G28 342 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 TRIB3Q96RU7 358 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 SH3GL2Q99962 352 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 TDRD1Q9BXT4 1180 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 ROPN1BQ9BZX4 212 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 ROPN1Q9HAT0 212 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 GTSE1Q9NYZ3 720 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 MYLKQ15746 1914 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-206ENST00000431390 TIMM44O43615 452 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 TCEA3O75764 348 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 NDST3O95803 873 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 FGF1P05230 155 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 DLDP09622 509 aaKnown RBP18.39■□□□□ 0.53
HMGN1-206ENST00000431390 ATXN1LP0C7T5 689 aaKnown RBP18.39■□□□□ 0.53
HMGN1-206ENST00000431390 STX2P32856 288 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 OPRD1P41143 372 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 CRADDP78560 199 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 CERCAMQ5T4B2 595 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 ATXN7L2Q5T6C5 722 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-206ENST00000431390 UNC5AQ6ZN44 842 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 CYS1Q717R9 158 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 PLCD3Q8N3E9 789 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 PHTF2Q8N3S3 785 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 NXPE3Q969Y0 559 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 MRGPRX3Q96LB0 322 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 NSMCE3Q96MG7 304 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 TM6SF2Q9BZW4 377 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 BRD9Q9H8M2 597 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 ELOVL2Q9NXB9 296 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 SOX13Q9UN79 622 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 TICRRQ7Z2Z1 1910 aa18.39■□□□□ 0.53
HMGN1-206ENST00000431390 FAM237BA0A1B0GVD1 139 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 PRR23AA6NEV1 266 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 POLBP06746 335 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 IVLP07476 585 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 TPH1P17752 444 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 CHRNA4P43681 627 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 DLG2Q15700 870 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 PCID2Q5JVF3 399 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 SIRPB2Q5JXA9 342 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 CAPN12Q6ZSI9 719 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 KDELC2Q7Z4H8 507 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 SLC25A41Q8N5S1 370 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 TERB1Q8NA31 727 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 KDM1BQ8NB78 822 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 RANBP9Q96S59 729 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 KIFC1Q9BW19 673 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 CIPCQ9C0C6 399 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 ACSS3Q9H6R3 686 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 PPCSQ9HAB8 311 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 PLAC1Q9HBJ0 212 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 MRM3Q9HC36 420 aaKnown RBP18.38■□□□□ 0.53
HMGN1-206ENST00000431390 MED4Q9NPJ6 270 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 FAM53CQ9NYF3 392 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 FETUBQ9UGM5 382 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 LIMD1Q9UGP4 676 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 SLCO3A1Q9UIG8 710 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 RABGEF1Q9UJ41 708 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 SLC8A2Q9UPR5 921 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 RAI2Q9Y5P3 530 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 TCRBV9S1A1TA0A576 114 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 USP1O94782 785 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 NBL1P41271 181 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 KLHL38Q2WGJ6 581 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 ACCSLQ4AC99 568 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 SPANXN3Q5MJ09 141 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 TMEM135Q86UB9 458 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 GOLGA6L1Q8N7Z2 621 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 PPHLN1Q8NEY8 458 aaKnown RBP18.38■□□□□ 0.53
HMGN1-206ENST00000431390 FBF1Q8TES7 1133 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 MYO19Q96H55 970 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 TNKS2Q9H2K2 1166 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 MFSD1Q9H3U5 465 aa18.38■□□□□ 0.53
HMGN1-206ENST00000431390 EVLQ9UI08 416 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-206ENST00000431390 MUC22E2RYF6 1773 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-206ENST00000431390 GOLGA6L10A6NI86 522 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 PRRT4C9JH25 899 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 SOCS5O75159 536 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 ADRA1DP25100 572 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 KDSRQ06136 332 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 TRAF2Q12933 501 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 MSLNQ13421 630 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-206ENST00000431390 FRG1Q14331 258 aaKnown RBP18.37■□□□□ 0.53
HMGN1-206ENST00000431390 GRM3Q14832 879 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CRYMQ14894 314 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 PTPRNQ16849 979 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 KRT71Q3SY84 523 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 HSP90B2PQ58FF3 399 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CARD16Q5EG05 197 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 ZNF449Q6P9G9 518 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CSGALNACT1Q8TDX6 532 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CYB5D2Q8WUJ1 264 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 TUBGCP5Q96RT8 1024 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CYTH2Q99418 400 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 ADGRE3Q9BY15 652 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms