RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 ARRDC2Q8TBH0 407 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 VAT1Q99536 393 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 TMEM121Q9BTD3 319 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 USP29Q9HBJ7 922 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 GLOD4Q9HC38 313 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 SMARCAL1Q9NZC9 954 aa13.02□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 LRRC72A6NJI9 287 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 CES2O00748 559 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TRAFD1O14545 582 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 FANCGO15287 622 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 SLC7A4O43246 635 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 STK10O94804 968 aaKnown RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 EPN2O95208 641 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 NFKB1P19838 968 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 XPAP23025 273 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 CASQ1P31415 396 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 CD68P34810 354 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TAS2R38P59533 333 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TRAF2Q12933 501 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 PAPD7Q5XG87 772 aaKnown RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 ZSWIM9Q86XI8 627 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 FAM71DQ8N9W8 422 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 NAP1L3Q99457 506 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 AP1M1Q9BXS5 423 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 C6orf106Q9H6K1 298 aaPredicted RBP13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 DKK3Q9UBP4 350 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TRHDEQ9UKU6 1024 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 PCDHGA5Q9Y5G8 931 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 RAI2Q9Y5P3 530 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
BX088651.4-202ENST00000428895 TP53BP1Q12888 1972 aaPredicted RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 NEMP1O14524 444 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 PLRG1O43660 514 aaKnown RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 SOCS5O75159 536 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 RHOBTB1O94844 696 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 PRKCGP05129 697 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 MMP2P08253 660 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 TIMP2P16035 220 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ITIH2P19823 946 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ABL2P42684 1182 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 PTGER3P43115 390 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 DHPSP49366 369 aaPredicted RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 GDF10P55107 478 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 SKOR1P84550 965 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 SPEM2Q0P670 501 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 OASLQ15646 514 aaKnown RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 CSRP2Q16527 193 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 CCNG2Q16589 344 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 UGP2Q16851 508 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ANKRD20A2Q5SQ80 823 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ANKRD20A1Q5TYW2 823 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ANKRD20A3Q5VUR7 823 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 PMS2CLQ68D20 193 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 BRAT1Q6PJG6 821 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 SLC41A1Q8IVJ1 513 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ACTRT1Q8TDG2 376 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 HCAR2Q8TDS4 363 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 RMDN1Q96DB5 314 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ECHDC3Q96DC8 303 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 IMP4Q96G21 291 aaKnown RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 HSPA12BQ96MM6 686 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 SLC25A51Q9H1U9 297 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 UBP1Q9NZI7 540 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 RSPH14Q9UHP6 348 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 CDV3Q9UKY7 258 aaKnown RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 TTC7AQ9ULT0 858 aaPredicted RBP13□□□□□ -0.33
BX088651.4-202ENST00000428895 CHKBQ9Y259 395 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 ITM2BQ9Y287 266 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
BX088651.4-202ENST00000428895 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
BX088651.4-202ENST00000428895 CFAP69A5D8W1 941 aa12.99□□□□□ -0.33
BX088651.4-202ENST00000428895 UPK3BL1B0FP48 263 aa12.99□□□□□ -0.33
BX088651.4-202ENST00000428895 UPK3BL2E5RIL1 263 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms