RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 IL1R1P14778 569 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GMPRP36959 345 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 LIG4P49917 911 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GRAPQ13588 217 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 FASTKQ14296 549 aaKnown RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CASC4Q6P4E1 433 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 ADCK1Q86TW2 530 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 KIFC3Q9BVG8 833 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 ING2Q9H160 280 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 DAGLAQ9Y4D2 1042 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 TCP10L2B9ZVM9 353 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 APOL1O14791 398 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 RAD51BO15315 384 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 B4GAT1O43505 415 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 TAL1P17542 331 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 LRPAP1P30533 357 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 PKLRP30613 574 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 RFC2P35250 354 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 LIMK2P53671 638 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 SLC13A2Q13183 592 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 NPTX1Q15818 432 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CARTPTQ16568 116 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 SHROOM1Q2M3G4 852 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 ZCCHC8Q6NZY4 707 aaKnown RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 TUBA3EQ6PEY2 450 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 GET4Q7L5D6 327 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 SLC51BQ86UW2 128 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 LINC00116Q8NCU8 138 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF560Q96MR9 790 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 SLA2Q9H6Q3 261 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 RUBCNLQ9H714 662 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 ASNSD1Q9NWL6 643 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 STMN3Q9NZ72 180 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CCDC78A2IDD5 438 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 NRP2O60462 931 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 DLGAP3O95886 979 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 HSD17B1P14061 328 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 HOXD10P28358 340 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 GRIA1P42261 906 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 GALK2Q01415 458 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 KRR1Q13601 381 aaKnown RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PTPN20Q4JDL3 420 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ZBTB41Q5SVQ8 909 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PRMT9Q6P2P2 845 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PRSS48Q7RTY5 328 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 R3HCC1LQ7Z5L2 792 aaKnown RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ELMOD2Q8IZ81 293 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 MAGEE2Q8TD90 523 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 MUS81Q96NY9 551 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 SLC39A3Q9BRY0 314 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ACE2Q9BYF1 805 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ACTR3BQ9P1U1 418 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 KCNN3Q9UGI6 736 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 MOSPD1Q9UJG1 213 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PTPRJQ12913 1337 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 B8ZZF3 427 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 MTSS1O43312 755 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 DAB1O75553 588 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 IL12AP29459 219 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 BCAR1P56945 870 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 YWHAEP62258 255 aaKnown RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PPP2R2BQ00005 443 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 DUSP7Q16829 419 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 AGKQ53H12 422 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 AGAP6Q5VW22 663 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PMF1Q6P1K2 205 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 CATSPER4Q7RTX7 472 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 THAP5Q7Z6K1 395 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 SVOPQ8N4V2 548 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 AFAP1L2Q8N4X5 818 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 KDM1BQ8NB78 822 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 OR13J1Q8NGT2 312 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 AGAP4Q96P64 663 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PEBP4Q96S96 227 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 DDX4Q9NQI0 724 aaKnown RBP16.19■□□□□ 0.18
C9orf3-206ENST00000428313 ABCD2Q9UBJ2 740 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 PMF1-BGLAPU3KQ54 211 aa16.19■□□□□ 0.18
C9orf3-206ENST00000428313 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
C9orf3-206ENST00000428313 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 CFBP00751 764 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 MYL3P08590 195 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 SHMT2P34897 504 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 NUDT1P36639 197 aa16.18■□□□□ 0.18
C9orf3-206ENST00000428313 ARL1P40616 181 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-206ENST00000428313 CCR10P46092 362 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms