RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PPIDQ08752 370 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 SPEM2Q0P670 501 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 KLF1Q13351 362 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 XRCC4Q13426 336 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ELAVL3Q14576 367 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 IHHQ14623 411 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 PDK1Q15118 436 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 NOMO1Q15155 1222 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CST6Q15828 149 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 HIF1AQ16665 826 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 FAM182AQ5T1J6 154 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ATXN7L2Q5T6C5 722 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 MARC1Q5VT66 337 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF776Q68DI1 518 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 TIGD7Q6NT04 549 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 KIAA1324Q6UXG2 1013 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 BZW1Q7L1Q6 419 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 MMAAQ8IVH4 418 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CCDC13Q8IYE1 715 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ATPAF2Q8N5M1 289 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CNTD1Q8N815 330 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CCNYQ8ND76 341 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 PIP4K2CQ8TBX8 421 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 OR8D1Q8WZ84 308 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 P3H4Q92791 437 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 FAM131CQ96AQ9 280 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 HAUS1Q96CS2 278 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF419Q96HQ0 510 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 IL12RB2Q99665 862 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 HEPHQ9BQS7 1158 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CPEB1Q9BZB8 566 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 SAP130Q9H0E3 1048 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 BRD8Q9H0E9 1235 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CARD9Q9H257 536 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 NEUROG2Q9H2A3 272 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 PABPC3Q9H361 631 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 BCCIPQ9P287 314 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 SEPT3Q9UH03 358 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 IL36AQ9UHA7 158 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 RAPGEFL1Q9UHV5 662 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 MBD1Q9UIS9 605 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 INVSQ9Y283 1065 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ATP8A1Q9Y2Q0 1164 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 JRKLQ9Y4A0 524 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 PCDHGA2Q9Y5H1 932 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 R4GN57 208 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 NUMA1Q14980 2115 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 SDK1Q7Z5N4 2213 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 HACD1B0YJ81 288 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 C10orf142B7Z368 130 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 KCNK1O00180 336 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 PLK4O00444 970 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 KRIT1O00522 736 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 KCNK3O14649 394 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 PPP1R12AO14974 1030 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 MID1O15344 667 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 KIF5CO60282 957 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 RNASEH1O60930 286 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF217O75362 1048 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 LEFTY1O75610 366 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 GJB3O75712 270 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 IL1BP01584 269 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 JCHAINP01591 159 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 DNTTP04053 509 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 PRNPP04156 253 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 ATP1A1P05023 1023 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 CCNB1P14635 433 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 C5AR1P21730 350 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 CXCR5P32302 372 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 DRD3P35462 400 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 RECQLP46063 649 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 TPMTP51580 245 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 RENBPP51606 427 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 IFI35P80217 286 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 OTUD4Q01804 1114 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 AP1B1Q10567 949 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 PRKD1Q15139 912 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SIX1Q15475 284 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 HS1BP3Q53T59 392 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 COX20Q5RI15 118 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 FAM46CQ5VWP2 391 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 NCEH1Q6PIU2 408 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 USP30Q70CQ3 517 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 DSG4Q86SJ6 1040 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SRLQ86TD4 932 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 ZC3H18Q86VM9 953 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SLC13A5Q86YT5 568 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 HDDC3Q8N4P3 179 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 AADATQ8N5Z0 425 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 OR6K2Q8NGY2 324 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 ACTL9Q8TC94 416 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 NSMCE1Q8WV22 266 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 GAB3Q8WWW8 586 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 ARRDC3Q96B67 414 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 LRIG1Q96JA1 1093 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms