RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 PRKCGP05129 697 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 RARAP10276 462 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 TCF4P15884 667 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 TIMP2P16035 220 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 JUNDP17535 347 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 CKMT2P17540 419 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 IL1R2P27930 398 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 RENBPP51606 427 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 CLDN6P56747 220 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 SEMG2Q02383 582 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 IL10RBQ08334 325 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.2
SNHG17-205ENST00000424235 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 SPECC1LQ69YQ0 1117 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 TMPRSS7Q7RTY8 843 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 LMX1AQ8TE12 382 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 BMFQ96LC9 184 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 TUBGCP5Q96RT8 1024 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 C1QTNF2Q9BXJ5 285 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 CPEB1Q9BZB8 566 aaKnown RBP16.27■□□□□ 0.2
SNHG17-205ENST00000424235 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 DKK3Q9UBP4 350 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 DOLKQ9UPQ8 538 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 MFHAS1Q9Y4C4 1052 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 PCDHGA1Q9Y5H4 931 aa16.27■□□□□ 0.2
SNHG17-205ENST00000424235 CABIN1Q9Y6J0 2220 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 PIAS2O75928 621 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 PCCBP05166 539 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 CDK4P11802 303 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 HCAR3P49019 387 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 ACADVLP49748 655 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 SUOXP51687 545 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 DPYSQ14117 519 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 RFTN1Q14699 578 aaPredicted RBP16.26■□□□□ 0.19
SNHG17-205ENST00000424235 TCEA2Q15560 299 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 DPYSL2Q16555 572 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 FAXCQ5TGI0 409 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 HES3Q5TGS1 186 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 KDM7AQ6ZMT4 941 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 ARHGAP12Q8IWW6 846 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 MDM1Q8TC05 714 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 ZNF641Q96N77 438 aaPredicted RBP16.26■□□□□ 0.19
SNHG17-205ENST00000424235 LENG8Q96PV6 779 aaPredicted RBP16.26■□□□□ 0.19
SNHG17-205ENST00000424235 CSPG4P5Q96PW8 444 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 SLC13A1Q9BZW2 595 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 SCUBE2Q9NQ36 999 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 ATP8A1Q9Y2Q0 1164 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 TTLL3Q9Y4R7 772 aa16.26■□□□□ 0.19
SNHG17-205ENST00000424235 ADAMTS20P59510 1910 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 SPTY2D1-AS1A0A0U1RR47 76 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 TAF4O00268 1085 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 TRIM38O00635 465 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 AREL1O15033 823 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 CYP1A2P05177 515 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 C1SP09871 688 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 IGFALSP35858 605 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 RGRP47804 291 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 ITKQ08881 620 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 ZNF211Q13398 564 aaPredicted RBP16.25■□□□□ 0.19
SNHG17-205ENST00000424235 FZD2Q14332 565 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 LRRC14Q15048 493 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 IRF4Q15306 451 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 UGP2Q16851 508 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 ODF2Q5BJF6 829 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 CYP4V2Q6ZWL3 525 aaPredicted RBP16.25■□□□□ 0.19
SNHG17-205ENST00000424235 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 POLNQ7Z5Q5 900 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 TMPRSS12Q86WS5 348 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 KCTD6Q8NC69 237 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 ZNF548Q8NEK5 533 aaPredicted RBP16.25■□□□□ 0.19
SNHG17-205ENST00000424235 OR8K1Q8NGG5 319 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 OR4C6Q8NH72 309 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 IL12RB2Q99665 862 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 ABCG4Q9H172 646 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
SNHG17-205ENST00000424235 APOBEC3BQ9UH17 382 aaKnown RBP16.25■□□□□ 0.19
SNHG17-205ENST00000424235 TRPM6Q9BX84 2022 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 FAM221BA6H8Z2 402 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 A8MX80 341 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 SPINT1O43278 529 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 AQP9O43315 295 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 ELFN1P0C7U0 828 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 C6P13671 934 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 NME1P15531 152 aaKnown RBP16.24■□□□□ 0.19
SNHG17-205ENST00000424235 HTR1BP28222 390 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 LIG3P49916 1009 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 AP1S1P61966 158 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 POLR2LP62875 67 aaKnown RBP16.24■□□□□ 0.19
SNHG17-205ENST00000424235 SMAD1Q15797 465 aaKnown RBP16.24■□□□□ 0.19
SNHG17-205ENST00000424235 DEFB133Q30KQ1 61 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 DENND2CQ68D51 928 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 TXNRD3NBQ6F5E7 133 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 RD3Q7Z3Z2 195 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 TP53INP2Q8IXH6 220 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 SLC25A45Q8N413 288 aa16.24■□□□□ 0.19
SNHG17-205ENST00000424235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNHG17-205ENST00000424235 NIPA2Q8N8Q9 360 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms