RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 AFMIDQ63HM1 303 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 AADACL2Q6P093 401 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 C22orf39Q6P5X5 142 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 TRIM69Q86WT6 500 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 CACUL1Q86Y37 369 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 ZCCHC9Q8N567 271 aaKnown RBP11.78□□□□□ -0.52
NCDN-204ENST00000423723 MINDY1Q8N5J2 469 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 UBLCP1Q8WVY7 318 aaPredicted RBP11.78□□□□□ -0.52
NCDN-204ENST00000423723 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 LRIG1Q96JA1 1093 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 CCDC114Q96M63 670 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 ATP13A1Q9HD20 1204 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 MTRF1LQ9UGC7 380 aaKnown RBP11.78□□□□□ -0.52
NCDN-204ENST00000423723 MFHAS1Q9Y4C4 1052 aa11.78□□□□□ -0.52
NCDN-204ENST00000423723 C1QTNF3-AMACRE9PGA6 284 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 RNF103O00237 685 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CBX4O00257 560 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 EIF3HO15372 352 aaKnown RBP eCLIP11.77□□□□□ -0.53
NCDN-204ENST00000423723 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 OPHN1O60890 802 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 RAMP2O60895 175 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CBFA2T3O75081 653 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 LRCH4O75427 683 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 RNASEH2AO75792 299 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 KRT14P02533 472 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 RARAP10276 462 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 NR1D1P20393 614 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 EPHB2P29323 1055 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 MIPP30301 263 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CTSKP43235 329 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 PSMD8P48556 350 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 NDST2P52849 883 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 DHX9Q08211 1270 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 ZNF844Q08AG5 666 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CNTN1Q12860 1018 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 SERINC3Q13530 473 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 ZNF423Q2M1K9 1284 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 PARP15Q460N3 678 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 RWDD4Q6NW29 188 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 LINGO4Q6UY18 593 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 CROCCP2Q86T23 111 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 IQCHQ86VS3 1027 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CHST14Q8NCH0 376 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 PEBP4Q96S96 227 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 EPAS1Q99814 870 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 SPON2Q9BUD6 331 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 PREBQ9HCU5 417 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 HOMER3Q9NSC5 361 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 DMTF1Q9Y222 760 aa11.77□□□□□ -0.53
NCDN-204ENST00000423723 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
NCDN-204ENST00000423723 AP1G1O43747 822 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 DFNA5O60443 496 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
NCDN-204ENST00000423723 FSBPO95073 299 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 ECEL1O95672 775 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 GSRP00390 522 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 NUDT17P0C025 328 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 DESP17661 470 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 PSMA2P25787 234 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 MAPK8P45983 427 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 CSNK1EP49674 416 aaKnown RBP11.76□□□□□ -0.53
NCDN-204ENST00000423723 GNGT1P63211 74 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 OVGP1Q12889 678 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 DPYSL2Q16555 572 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 KIF19Q2TAC6 998 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 SCYL2Q6P3W7 929 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
NCDN-204ENST00000423723 GLRX5Q86SX6 157 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 HOOK3Q86VS8 718 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 CPNE8Q86YQ8 564 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 RHOT1Q8IXI2 618 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 KATNAL2Q8IYT4 538 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 GRK7Q8WTQ7 553 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 ARRDC3Q96B67 414 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 HEPHQ9BQS7 1158 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
NCDN-204ENST00000423723 TRIM31Q9BZY9 425 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 PDFQ9HBH1 243 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 GRHL1Q9NZI5 618 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 WHRNQ9P202 907 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 IL36AQ9UHA7 158 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 IP6K2Q9UHH9 426 aa11.76□□□□□ -0.53
NCDN-204ENST00000423723 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms