RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 PPP1R2P3Q6NXS1 205 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 IRF2BP2Q7Z5L9 587 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
SREBF1-206ENST00000423161 VCPIP1Q96JH7 1222 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 SYT11Q9BT88 431 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 LRRC61Q9BV99 259 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 SLC13A1Q9BZW2 595 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 PRORYQ9H606 182 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 LRRC19Q9H756 370 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 PDFQ9HBH1 243 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 DONSONQ9NYP3 566 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 MYO6Q9UM54 1294 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 COQ6Q9Y2Z9 468 aa18.67■□□□□ 0.58
SREBF1-206ENST00000423161 TSPAN11A1L157 253 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 EME2A4GXA9 379 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-206ENST00000423161 J3KR12 359 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 TEX33O43247 280 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 PRAMEF11O60813 436 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 ANXA6P08133 673 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 TGM2P21980 687 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 NDST2P52849 883 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
SREBF1-206ENST00000423161 TYRO3Q06418 890 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 MAMLD1Q13495 774 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 CFAP58Q5T655 872 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 FAXCQ5TGI0 409 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 GLMNQ92990 594 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 TBATAQ96M53 351 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-206ENST00000423161 UBL7Q96S82 380 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-206ENST00000423161 BOCQ9BWV1 1114 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 SUV39H2Q9H5I1 410 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 DHX35Q9H5Z1 703 aaKnown RBP18.66■□□□□ 0.58
SREBF1-206ENST00000423161 PARVAQ9NVD7 372 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 RAI2Q9Y5P3 530 aa18.66■□□□□ 0.58
SREBF1-206ENST00000423161 ARHGAP42A6NI28 874 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 EEF2KO00418 725 aaKnown RBP18.65■□□□□ 0.58
SREBF1-206ENST00000423161 MUSKO15146 869 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LZTS3O60299 673 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-206ENST00000423161 MBD3O95983 291 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 C6P13671 934 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 PCBP4P57723 403 aaKnown RBP18.65■□□□□ 0.58
SREBF1-206ENST00000423161 PPARDQ03181 441 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LRRC14Q15048 493 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 CA9Q16790 459 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 UGP2Q16851 508 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 ISXQ2M1V0 245 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 C6orf132Q5T0Z8 1188 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 PLEKHA7Q6IQ23 1121 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 CRTC1Q6UUV9 634 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 SPACA3Q8IXA5 215 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 SLC35F3Q8IY50 421 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LSMEM2Q8N112 164 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 HCAR2Q8TDS4 363 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 ZNF578Q96N58 590 aaPredicted RBP18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LGMNQ99538 433 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 SNRNP25Q9BV90 132 aaKnown RBP18.65■□□□□ 0.58
SREBF1-206ENST00000423161 SLC39A8Q9C0K1 460 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 POLR1BQ9H9Y6 1135 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 PCDH12Q9NPG4 1184 aa18.65■□□□□ 0.58
SREBF1-206ENST00000423161 LRRC53A6NM62 1247 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 EIF3CLB5ME19 914 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 BUB1BO60566 1050 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 DXOO77932 396 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 TSHRP16473 764 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 LSSP48449 732 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 RPIAP49247 311 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 PAPOLAP51003 745 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 TLE3Q04726 772 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 ASIC2Q16515 512 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 WSCD2Q2TBF2 565 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 PERM1Q5SV97 790 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 ERMARDQ5T6L9 678 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 ERAP2Q6P179 960 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 BRAT1Q6PJG6 821 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 ZNF248Q8NDW4 579 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 TPCN2Q8NHX9 752 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 ZNF641Q96N77 438 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 TUBGCP5Q96RT8 1024 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 PEBP4Q96S96 227 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 KCTD15Q96SI1 283 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 EIF3CQ99613 913 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 CLPBQ9H078 707 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 NAT10Q9H0A0 1025 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.57
SREBF1-206ENST00000423161 PCSK1NQ9UHG2 260 aa18.64■□□□□ 0.57
SREBF1-206ENST00000423161 YY2O15391 372 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 DAPK3O43293 454 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 PALMO75781 387 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 RNF8O76064 485 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 MMP12P39900 470 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 RGRP47804 291 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 PEX5P50542 639 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 BLKP51451 505 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 ANO6Q4KMQ2 910 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 C3orf38Q5JPI3 329 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 RFX8Q6ZV50 586 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 SRLQ86TD4 932 aa18.63■□□□□ 0.57
SREBF1-206ENST00000423161 ZSWIM9Q86XI8 627 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms