RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 GPR27Q9NS67 375 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 WASF3Q9UPY6 502 aa20.51■□□□□ 0.87
GTF3A-202ENST00000419181 A6NNZ2 444 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 CR2P20023 1033 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 XPAP23025 273 aaPredicted RBP20.5■□□□□ 0.87
GTF3A-202ENST00000419181 KDELR1P24390 212 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 GARSP41250 739 aaKnown RBP20.5■□□□□ 0.87
GTF3A-202ENST00000419181 SLC1A1P43005 524 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 MAGEA1P43355 309 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 HADHBP55084 474 aaKnown RBP20.5■□□□□ 0.87
GTF3A-202ENST00000419181 BCL2L1Q07817 233 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 ELP6Q0PNE2 266 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 TMEM52BQ4KMG9 183 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 LRRC38Q5VT99 294 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 KYAT3Q6YP21 454 aaKnown RBP20.5■□□□□ 0.87
GTF3A-202ENST00000419181 GATAD2AQ86YP4 633 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 SLC22A18ASQ8N1D0 253 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 PGBD5Q8N414 524 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 DENND6BQ8NEG7 585 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 BMFQ96LC9 184 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 MGME1Q9BQP7 344 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 PCDH12Q9NPG4 1184 aa20.5■□□□□ 0.87
GTF3A-202ENST00000419181 COL5A1P20908 1838 aaPredicted RBP20.5■□□□□ 0.87
GTF3A-202ENST00000419181 SPEGQ15772 3267 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 LRRD1A4D1F6 860 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 POM121BA6NF01 834 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 ZNF487B1APH4 448 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 TRAFD1O14545 582 aaPredicted RBP20.49■□□□□ 0.87
GTF3A-202ENST00000419181 MMP20O60882 483 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 INAVAQ3KP66 663 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 ZFYVE27Q5T4F4 411 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 MARC1Q5VT66 337 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 VSIG1Q86XK7 387 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 BBS5Q8N3I7 341 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 CXorf40AQ8TE69 158 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 NSMCE1Q8WV22 266 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 SPOCK2Q92563 424 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 RNF157Q96PX1 679 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 CDC6Q99741 560 aa20.49■□□□□ 0.87
GTF3A-202ENST00000419181 WRAP53Q9BUR4 548 aaKnown RBP20.49■□□□□ 0.87
GTF3A-202ENST00000419181 ARID1BQ8NFD5 2236 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-202ENST00000419181 C3orf70A6NLC5 250 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-202ENST00000419181 RIOK3O14730 519 aaKnown RBP20.48■□□□□ 0.87
GTF3A-202ENST00000419181 TM7SF2O76062 418 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 CYLC1P35663 651 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-202ENST00000419181 MMP12P39900 470 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 MMP13P45452 471 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 ERAP2Q6P179 960 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 Q6ZSR6 202 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 KANSL1Q7Z3B3 1105 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 PTAR1Q7Z6K3 402 aaPredicted RBP20.48■□□□□ 0.87
GTF3A-202ENST00000419181 TEX26Q8N6G2 289 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 CENPTQ96BT3 561 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 NUDCD1Q96RS6 583 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 ATP8A1Q9Y2Q0 1164 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 PCDHA13Q9Y5I0 950 aa20.48■□□□□ 0.87
GTF3A-202ENST00000419181 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.47■□□□□ 0.87
GTF3A-202ENST00000419181 TTC24A2A3L6 582 aaPredicted RBP20.47■□□□□ 0.87
GTF3A-202ENST00000419181 FPGTO14772 594 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 SOCS5O75159 536 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 MAP3K6O95382 1288 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 ITGAVP06756 1048 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 FTH1P19P0C7X4 201 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 GBE1Q04446 702 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 BNIP3Q12983 259 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 SPA17Q15506 151 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 RALGPS1Q5JS13 557 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 DCP2Q8IU60 420 aaKnown RBP20.47■□□□□ 0.87
GTF3A-202ENST00000419181 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 RHOT1Q8IXI2 618 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 MAML1Q92585 1016 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 FATE1Q969F0 183 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 TSGA13Q96PP4 275 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 TFR2Q9UP52 801 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 HYOU1Q9Y4L1 999 aa20.47■□□□□ 0.87
GTF3A-202ENST00000419181 SOWAHDA6NJG2 315 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 HTRA2O43464 458 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 NDUFA10O95299 355 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TRIM16O95361 564 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TOP3BO95985 862 aaKnown RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 PRKCGP05129 697 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 COMTP21964 271 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 RABIFP47224 123 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 PFN3P60673 137 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 MAXP61244 160 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 POLR2LP62875 67 aaKnown RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 SLC10A2Q12908 348 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 IFI16Q16666 785 aaKnown RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TIGD7Q6NT04 549 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 KDM7AQ6ZMT4 941 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 PLD5Q8N7P1 536 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TP53I13Q8NBR0 393 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 IFT43Q96FT9 208 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 C1QTNF7Q9BXJ2 289 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 NOD2Q9HC29 1040 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 LUC7LQ9NQ29 371 aaKnown RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 SCUBE2Q9NQ36 999 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TOR4AQ9NXH8 423 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms