RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MYF6P23409 242 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 UFM1P61960 85 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 YWHAZP63104 245 aaKnown RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 KIF5AQ12840 1032 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 RUNX2Q13950 521 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 KEAP1Q14145 624 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 NFATC4Q14934 902 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 PLCB4Q15147 1175 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC9B1Q4ZJI4 515 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 GORABQ5T7V8 394 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 H1FNTQ75WM6 255 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 TADA2BQ86TJ2 420 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 DHX40Q8IX18 779 aaKnown RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 RBMXL3Q8N7X1 1067 aaKnown RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 ST8SIA4Q92187 359 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 TRIB2Q92519 343 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 TXNDC15Q96J42 360 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 SLC25A33Q9BSK2 321 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 CD93Q9NPY3 652 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 WASH6PQ9NQA3 447 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 OR6C3Q9NZP0 311 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 WNT16Q9UBV4 365 aa4.6□□□□□ -1.67
HMGB1P49-201ENST00000418882 GAGE10A6NGK3 116 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 NPIPB11E5RHQ5 1161 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 IKBKBO14920 756 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 KCNJ13O60928 360 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 PTPN2P17706 415 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 ABCD3P28288 659 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 C21orf33P30042 268 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 NR1H2P55055 460 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 BRWD1-AS2P59051 145 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 RPP30P78346 268 aaKnown RBP4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 DSC1Q08554 894 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 ARHGEF6Q15052 776 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 GPR68Q15743 365 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 EFNB3Q15768 340 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 FAM69BQ5VUD6 431 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 TYW3Q6IPR3 259 aaKnown RBP4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 PRSS57Q6UWY2 283 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 ARMC9Q7Z3E5 817 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 LMO3Q8TAP4 145 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 RNF125Q96EQ8 232 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 RRP36Q96EU6 259 aaKnown RBP4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 KLHL15Q96M94 604 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 CTAGE1Q96RT6 745 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 MXRA8Q9BRK3 442 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 USP44Q9H0E7 712 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 TKTL2Q9H0I9 626 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 HCN3Q9P1Z3 774 aa4.59□□□□□ -1.67
HMGB1P49-201ENST00000418882 LOC102724159A0A0B4J2E5 919 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 A0A1W2PQM1 296 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 GUCY1B2O75343 617 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 VNN2O95498 520 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZBTB11O95625 1053 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 F9P00740 461 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 PRSS2P07478 247 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZNF8P17098 575 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 SSTR2P30874 369 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 FMO4P31512 558 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 ST3GAL1Q11201 340 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 CAMK1Q14012 370 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 DHX34Q14147 1143 aaKnown RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 PWP2Q15269 919 aaKnown RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 TAF11Q15544 211 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 BAK1Q16611 211 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 KLHL22Q53GT1 634 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 SGO1Q5FBB7 561 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 TXNDC8Q6A555 127 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 FBXO46Q6PJ61 603 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 TDRPQ86YL5 185 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 SLC35F3Q8IY50 421 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 PGBD5Q8N414 524 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 FAM216AQ8WUB2 273 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 WASF1Q92558 559 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 PABPC5Q96DU9 382 aaKnown RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZC3HAV1LQ96H79 300 aaKnown RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 FIZ1Q96SL8 496 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 SLC25A18Q9H1K4 315 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 SLCO5A1Q9H2Y9 848 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 CISD1Q9NZ45 108 aaKnown RBP4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 NFE2L3Q9Y4A8 694 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 CYP46A1Q9Y6A2 500 aa4.58□□□□□ -1.68
HMGB1P49-201ENST00000418882 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 PLEKHD1A6NEE1 506 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 HSPA12AO43301 675 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 TNFSF14O43557 240 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 CH25HO95992 272 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 AFPP02771 609 aaKnown RBP4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 FCGR1AP12314 374 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 RPL3P39023 403 aaKnown RBP4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 DDR1Q08345 913 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 RNPS1Q15287 305 aaKnown RBP4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 MMEL1Q495T6 779 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 FAM69AQ5T7M9 428 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 C9orf57Q5W0N0 161 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 NADSYN1Q6IA69 706 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 C16orf82Q7Z2V1 217 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms