RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SERPINB6P35237 376 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 MMP12P39900 470 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 GARSP41250 739 aaKnown RBP20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 GBE1Q04446 702 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 BNIP3Q12983 259 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 HNRNPDQ14103 355 aaKnown RBP20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 TRIP6Q15654 476 aaKnown RBP20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 LRRC38Q5VT99 294 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 KYAT3Q6YP21 454 aaKnown RBP20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 VSIG1Q86XK7 387 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 CCDC170Q8IYT3 715 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 KCTD6Q8NC69 237 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 FATE1Q969F0 183 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 RNF157Q96PX1 679 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 TMEM121BQ9BXQ6 578 aaPredicted RBP20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 PCDH12Q9NPG4 1184 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 CEP295Q9C0D2 2601 aa20.81■□□□□ 0.92
PKNOX1-202ENST00000418336 RCCD1A6NED2 376 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SOWAHDA6NJG2 315 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 HTRA2O43464 458 aaPredicted RBP20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 MMP20O60882 483 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 PRKCGP05129 697 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 THEGLP0DJG4 465 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 IGFALSP35858 605 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SUOXP51687 545 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 RALGDSQ12967 914 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 TAZQ16635 292 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SLC45A4Q5BKX6 768 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SLC9A4Q6AI14 798 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 ALG1LQ6GMV1 187 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 BRAT1Q6PJG6 821 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SLCO6A1Q86UG4 719 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 GATAD2AQ86YP4 633 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 TP53I13Q8NBR0 393 aaPredicted RBP20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 SKA1Q96BD8 255 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 KLHDC7BQ96G42 594 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 TSGA13Q96PP4 275 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 NUDCD1Q96RS6 583 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 CALN1Q9BXU9 219 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 PNMA8BQ9ULN7 279 aaPredicted RBP20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 HYOU1Q9Y4L1 999 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 PCDHA13Q9Y5I0 950 aa20.8■□□□□ 0.92
PKNOX1-202ENST00000418336 ACACBO00763 2458 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 MAP3K6O95382 1288 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 GIMD1P0DJR0 217 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 COMTP21964 271 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 MAGEA1P43355 309 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 PFN3P60673 137 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 AP1S1P61966 158 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 AGERQ15109 404 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 RAD9BQ6WBX8 426 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 LRRC49Q8IUZ0 686 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 ATPAF2Q8N5M1 289 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 DENND6BQ8NEG7 585 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 SETD7Q8WTS6 366 aaKnown RBP20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 LRRN4Q8WUT4 740 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 GOLPH3Q9H4A6 298 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 ATP13A3Q9H7F0 1226 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 NOD2Q9HC29 1040 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 MBNL1Q9NR56 388 aaKnown RBP20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 DTLQ9NZJ0 730 aa20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 TPRP12270 2363 aaKnown RBP20.79■□□□□ 0.92
PKNOX1-202ENST00000418336 AKAP13Q12802 2813 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 A6NNZ2 444 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 FTH1P19P0C7X4 201 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 HSPA9P38646 679 aaKnown RBP20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 SLC1A1P43005 524 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 SCNN1BP51168 640 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 RENBPP51606 427 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 MAXP61244 160 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 TRAF2Q12933 501 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 FZD2Q14332 565 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 Q6ZSR6 202 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 RAB44Q7Z6P3 723 aaPredicted RBP20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 WRAP53Q9BUR4 548 aaKnown RBP20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 ATP8A1Q9Y2Q0 1164 aa20.78■□□□□ 0.92
PKNOX1-202ENST00000418336 A0A0A6YYK5 440 aaPredicted RBP20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 FAM221BA6H8Z2 402 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 YKT6O15498 198 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 FZD6O60353 706 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 NDUFA10O95299 355 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 ATXN1LP0C7T5 689 aaKnown RBP20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 SPINK2P20155 84 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 SERPINA4P29622 427 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 GRK6P43250 576 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 SEMG2Q02383 582 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 BCL2L1Q07817 233 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 MAP7D3Q8IWC1 876 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 CBARPQ8N350 705 aaPredicted RBP20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 SLC25A45Q8N413 288 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 OXR1Q8N573 874 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 FAM174AQ8TBP5 190 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 RHBDD1Q8TEB9 315 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 KLF15Q9UIH9 416 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 ANGPTL2Q9UKU9 493 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 COQ6Q9Y2Z9 468 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 PCDHGC4Q9Y5F7 938 aa20.77■□□□□ 0.92
PKNOX1-202ENST00000418336 SPTY2D1-AS1A0A0U1RR47 76 aa20.76■□□□□ 0.91
PKNOX1-202ENST00000418336 MATN3O15232 486 aa20.76■□□□□ 0.91
PKNOX1-202ENST00000418336 MAGEC1O60732 1142 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms