RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 DCLRE1AQ6PJP8 1040 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 SCIMPQ6UWF3 145 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 AGMOQ6ZNB7 445 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 METTL25Q8N6Q8 603 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 BLOC1S5Q8TDH9 187 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 LPGAT1Q92604 370 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 RTP3Q9BQQ7 232 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 AGO3Q9H9G7 860 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 LIN28AQ9H9Z2 209 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NMUR1Q9HB89 426 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 RIMS3Q9UJD0 308 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 HEMK1Q9Y5R4 338 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NCF1BA6NI72 391 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 SAC3D1A6NKF1 404 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NCF1CA8MVU1 366 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 SMIM18P0DKX4 95 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NCF1P14598 390 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 CES1P23141 567 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 LRPAP1P30533 357 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 CD52P31358 61 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ARCN1P48444 511 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 MYBPC1Q00872 1141 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 SLC10A7Q0GE19 358 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 CAPRIN1Q14444 709 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 DDR2Q16832 855 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 UGP2Q16851 508 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 HDAC10Q969S8 669 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ZNF512Q96ME7 567 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 KCNA7Q96RP8 456 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 COQ10BQ9H8M1 238 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ZDHHC7Q9NXF8 308 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 BTRCQ9Y297 605 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 PSMD12O00232 456 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NR5A2O00482 541 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 KIF3CO14782 793 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ANXA9O76027 345 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 CNTN5O94779 1100 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 MT-ND1P03886 318 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 HAPLN1P10915 354 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 PCSK1P29120 753 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 PRDX6P30041 224 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ARL1P40616 181 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 COG7P83436 770 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 DDIASQ8IXT1 998 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 VAT1Q99536 393 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 NOL11Q9H8H0 719 aaKnown RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 DMAP1Q9NPF5 467 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 C6orf203Q9P0P8 240 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ANKRD6Q9Y2G4 727 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 ACTL7AQ9Y615 435 aa11.98□□□□□ -0.49
LIMK1-202ENST00000418310 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 PRORSD1PA6NEY8 169 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 TARM1B6A8C7 271 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 H2AFYO75367 372 aaKnown RBP11.97□□□□□ -0.49
LIMK1-202ENST00000418310 TFAP2AP05549 437 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 SLC7A2P52569 658 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 CDH15P55291 814 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 REP15Q6BDI9 236 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 HMGCLL1Q8TB92 370 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 ESAMQ96AP7 390 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 CDH9Q9ULB4 789 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 HTTP42858 3142 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 MRASO14807 208 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 IRAK2O43187 625 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 AKAP10O43572 662 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 TSPAN3O60637 253 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 PAMP19021 973 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 ATP5F1P24539 256 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-202ENST00000418310 GEMP55040 296 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 APLFQ8IW19 511 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-202ENST00000418310 SPPL2BQ8TCT7 592 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 C3orf30Q96M34 536 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 Q9H521 79 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 VCX3AQ9NNX9 186 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 EPS15L1Q9UBC2 864 aa11.97□□□□□ -0.49
LIMK1-202ENST00000418310 PRG3Q9Y2Y8 225 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-202ENST00000418310 UBA6A0AVT1 1052 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 E9PAM4 449 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 FBP2O00757 339 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 GRK4P32298 578 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 GRIA3P42263 894 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 CDKN2DP55273 166 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 YBX1P67809 324 aaKnown RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 PLIN5Q00G26 463 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 GALNT3Q14435 633 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 FSCN1Q16658 493 aaKnown RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 OVOS1Q6IE37 1185 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 METTL23Q86XA0 190 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 NSUN5Q96P11 429 aaKnown RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 SMIM14Q96QK8 99 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms