RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 AGO1Q9UL18 857 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 H2AFXP16104 143 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PECAM1P16284 738 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 GLRA2P23416 452 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 TRAF3Q13114 568 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 C16orf46Q6P387 395 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ULK2Q8IYT8 1036 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 OR14C36Q8NHC7 312 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 SNRNP27Q8WVK2 155 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 METTL21AQ8WXB1 218 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CD101Q93033 1021 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ZBTB10Q96DT7 871 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 JSRP1Q96MG2 331 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 GRM6O15303 877 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CHADO15335 359 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ADSLP30566 484 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MAPK11Q15759 364 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 NEK5Q6P3R8 708 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 POMZP3Q6PJE2 187 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 C2orf73Q8N5S3 287 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 OR4A15Q8NGL6 344 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 OXNAD1Q96HP4 312 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ARMCX1Q9P291 453 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 TISP43B9A030 160 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 LRATO95237 230 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CALCAP01258 141 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 FAM58BPP0C7Q3 252 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 RARAP10276 462 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PSMD4P55036 377 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CDRT15Q96T59 188 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ADAM28Q9UKQ2 775 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 COLEC10Q9Y6Z7 277 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 C15orf38-AP3S2A0A0A6YYH1 394 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 WASP42768 502 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MBTD1Q05BQ5 628 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 TSC22D1Q15714 1073 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ARPINQ7Z6K5 226 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 TRPM4Q8TD43 1214 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 SLC28A1O00337 649 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 BIRC5O15392 142 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CLOCKO15516 846 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ULK1O75385 1050 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 ZFP1Q6P2D0 407 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 RAVER1Q8IY67 606 aaKnown RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 BEND7Q8N7W2 519 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-205ENST00000418258 IL25Q9H293 177 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
PTCH1-205ENST00000418258 PIGNO95427 931 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 GOT1P17174 413 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 MAGEB3O15480 346 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 FGBP02675 491 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 GLI1P08151 1106 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 TSPAN8P19075 237 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 ZNF143P52747 638 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-205ENST00000418258 PTPRNQ16849 979 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 SNX32Q86XE0 403 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 KATNAL2Q8IYT4 538 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 ATP6V1C2Q8NEY4 427 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 CD248Q9HCU0 757 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 PDE4DIPQ5VU43 2346 aa11.27□□□□□ -0.6
PTCH1-205ENST00000418258 IDH3BO43837 385 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TIPRLO75663 272 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 UBOX5O94941 541 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 MATN4O95460 622 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 ME2P23368 584 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 KLHL12Q53G59 568 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 KRT74Q7RTS7 529 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PLPPR4Q7Z2D5 763 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 DAW1Q8N136 415 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 HIC2Q96JB3 615 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 EQTNQ9NQ60 294 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 KCNE2Q9Y6J6 123 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 GJB1P08034 283 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-205ENST00000418258 TNFSF9P41273 254 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 MASP1P48740 699 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 ARF5P84085 180 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 MAMLD1Q13495 774 aa11.27□□□□□ -0.61
PTCH1-205ENST00000418258 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
PTCH1-205ENST00000418258 UNC5AQ6ZN44 842 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms