RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 SYCE1Q8N0S2 351 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 EXD1Q8NHP7 514 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 ASB12Q8WXK4 309 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 MAML1Q92585 1016 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 KLK6Q92876 244 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 DESI2Q9BSY9 194 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 POLR1EQ9GZS1 481 aaKnown RBP16.33■□□□□ 0.2
SNHG17-203ENST00000417578 BRD8Q9H0E9 1235 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 NT5MQ9NPB1 228 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 SNX11Q9Y5W9 270 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 HS3ST3A1Q9Y663 406 aa16.33■□□□□ 0.2
SNHG17-203ENST00000417578 ASCC3Q8N3C0 2202 aaKnown RBP16.33■□□□□ 0.2
SNHG17-203ENST00000417578 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 UPK3BL1B0FP48 263 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 UPK3BL2E5RIL1 263 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 TLR4O00206 839 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 WNT9AO14904 365 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 PPP1R12AO14974 1030 aaPredicted RBP16.32■□□□□ 0.2
SNHG17-203ENST00000417578 ARHGAP6O43182 974 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 NRDCO43847 1150 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 SOCS5O75159 536 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 PAK4O96013 591 aaPredicted RBP16.32■□□□□ 0.2
SNHG17-203ENST00000417578 ZNF883P0CG24 379 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 CCNB1P14635 433 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 NFKBIAP25963 317 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 CTSKP43235 329 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 PPIDQ08752 370 aaKnown RBP16.32■□□□□ 0.2
SNHG17-203ENST00000417578 ITKQ08881 620 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 TP53BP1Q12888 1972 aaPredicted RBP16.32■□□□□ 0.2
SNHG17-203ENST00000417578 TMEM52BQ4KMG9 183 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 ERMP1Q7Z2K6 904 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 CCDC50Q8IVM0 306 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 PGBD5Q8N414 524 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 KNL1Q8NG31 2342 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 CXorf40AQ8TE69 158 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 ECHDC3Q96DC8 303 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 KLHDC7BQ96G42 594 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 C1QTNF2Q9BXJ5 285 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 RBM22Q9NW64 420 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■□□ 15.7
SNHG17-203ENST00000417578 PCDHA3Q9Y5H8 950 aa16.32■□□□□ 0.2
SNHG17-203ENST00000417578 TMEM131Q92545 1883 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 IGLON5A6NGN9 336 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 TRAFD1O14545 582 aaPredicted RBP16.31■□□□□ 0.2
SNHG17-203ENST00000417578 GJB3O75712 270 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 WNT1P04628 370 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 PRLRP16471 622 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 TGM2P21980 687 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 CTNNA1P35221 906 aaKnown RBP16.31■□□□□ 0.2
SNHG17-203ENST00000417578 CETN2P41208 172 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 COPS2P61201 443 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 MAXP61244 160 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 DYNLT1P63172 113 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
SNHG17-203ENST00000417578 PPP2R5EQ16537 467 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 KAZNQ674X7 775 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 LAYNQ6UX15 382 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 LRRC8AQ8IWT6 810 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
SNHG17-203ENST00000417578 TMEM145Q8NBT3 493 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 OR2I1PQ8NGU4 316 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 LENG8Q96PV6 779 aaPredicted RBP16.31■□□□□ 0.2
SNHG17-203ENST00000417578 C1QTNF7Q9BXJ2 289 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 SLC32A1Q9H598 525 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 NOD2Q9HC29 1040 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 AMFRQ9UKV5 643 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 ITM2BQ9Y287 266 aa16.31■□□□□ 0.2
SNHG17-203ENST00000417578 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 RIOK3O14730 519 aaKnown RBP16.3■□□□□ 0.2
SNHG17-203ENST00000417578 SPINT1O43278 529 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 HTRA2O43464 458 aaPredicted RBP16.3■□□□□ 0.2
SNHG17-203ENST00000417578 CST8O60676 142 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 MMP20O60882 483 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 TM7SF2O76062 418 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 KRT10P13645 584 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 CSRP1P21291 193 aaKnown RBP16.3■□□□□ 0.2
SNHG17-203ENST00000417578 CTNNA2P26232 953 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 RWDD2BP57060 319 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 NXPH1P58417 271 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 AP1B1Q10567 949 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 LRRC73Q5JTD7 316 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 NDUFAF2Q8N183 169 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 OXR1Q8N573 874 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 LRRC57Q8N9N7 239 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 KRT35Q92764 455 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 P3H4Q92791 437 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 LGMNQ99538 433 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 ERVMER34-1Q9H9K5 563 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 PCDH12Q9NPG4 1184 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 GGT7Q9UJ14 662 aa16.3■□□□□ 0.2
SNHG17-203ENST00000417578 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms