RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 IRF4Q15306 451 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 DCUN1D2Q6PH85 259 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 SLC35F3Q8IY50 421 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 UMODL1-AS1Q8N2C9 162 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 ATXN7L3BQ96GX2 97 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 AGPAT1Q99943 283 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 CNPY3Q9BT09 278 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 CPEB1Q9BZB8 566 aaKnown RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 ASCL3Q9NQ33 180 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 DONSONQ9NYP3 566 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 LHX3Q9UBR4 397 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 UBA2Q9UBT2 640 aaPredicted RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 LIMA1Q9UHB6 759 aaKnown RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 PNMA8BQ9ULN7 279 aaPredicted RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 DOLKQ9UPQ8 538 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 SATB2Q9UPW6 733 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 TDRD6O60522 2096 aaKnown RBP14.58□□□□□ -0.08
PAF1-202ENST00000416728 YY2O15391 372 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 TSHRP16473 764 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 PEX5P50542 639 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 TPI1P60174 286 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 MYL5Q02045 173 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 GRM3Q14832 879 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 LRRC14Q15048 493 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 CYTH1Q15438 398 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 TMEM52BQ4KMG9 183 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 PERM1Q5SV97 790 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 CFAP58Q5T655 872 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 ESRP1Q6NXG1 681 aaKnown RBP14.58□□□□□ -0.08
PAF1-202ENST00000416728 IGF2-ASQ6U949 168 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 DNAAF5Q86Y56 855 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 FSTL5Q8N475 847 aaPredicted RBP14.58□□□□□ -0.08
PAF1-202ENST00000416728 WDR48Q8TAF3 677 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 HCAR2Q8TDS4 363 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 VCPIP1Q96JH7 1222 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 CLPBQ9H078 707 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 COQ6Q9Y2Z9 468 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 ENTPD2Q9Y5L3 495 aa14.58□□□□□ -0.08
PAF1-202ENST00000416728 TMEM110-MUSTN1A8MSY1 372 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 KLK10O43240 276 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 C1QL1O75973 258 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 CCDC172P0C7W6 258 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 C6P13671 934 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 CDK11BP21127 795 aaKnown RBP14.57□□□□□ -0.08
PAF1-202ENST00000416728 HTR1BP28222 390 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 HTR7P34969 479 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 HK3P52790 923 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 ELOCQ15369 112 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 UGP2Q16851 508 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 WSCD2Q2TBF2 565 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 ERAP2Q6P179 960 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 SASS6Q6UVJ0 657 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 CLEC17AQ6ZS10 378 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 RBM43Q6ZSC3 357 aaKnown RBP14.57□□□□□ -0.08
PAF1-202ENST00000416728 HID1Q8IV36 788 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 MCOLN2Q8IZK6 566 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
PAF1-202ENST00000416728 ZNF641Q96N77 438 aaPredicted RBP14.57□□□□□ -0.08
PAF1-202ENST00000416728 SLC46A1Q96NT5 459 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 ERGIC2Q96RQ1 377 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 CCDC3Q9BQI4 270 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 SUV39H2Q9H5I1 410 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 SYNDIG1Q9H7V2 258 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 ANO10Q9NW15 660 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 PADI4Q9UM07 663 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 PCDHGA8Q9Y5G5 932 aa14.57□□□□□ -0.08
PAF1-202ENST00000416728 CHD5Q8TDI0 1954 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 A0A1W2PNU3 283 aaPredicted RBP14.56□□□□□ -0.08
PAF1-202ENST00000416728 TSPAN11A1L157 253 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 RASGRP1O95267 797 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 ALPIP09923 528 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 CTSEP14091 401 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 NDST2P52849 883 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 SPIDRQ14159 915 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 ALG11Q2TAA5 492 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 TAF1BQ53T94 588 aaPredicted RBP14.56□□□□□ -0.08
PAF1-202ENST00000416728 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 FOXR1Q6PIV2 292 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 BRAT1Q6PJG6 821 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 ARL10Q8N8L6 244 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 PCDH19Q8TAB3 1148 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 TUBGCP5Q96RT8 1024 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 LRRC19Q9H756 370 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 PDFQ9HBH1 243 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 CPNE5Q9HCH3 593 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 GPATCH2LQ9NWQ4 482 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 GULP1Q9UBP9 304 aa14.56□□□□□ -0.08
PAF1-202ENST00000416728 LRRC10BA6NIK2 292 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 J3KR12 359 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 ERVH48-1M5A8F1 160 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 PRAMEF11O60813 436 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 CELA2BP08218 269 aaPredicted RBP14.55□□□□□ -0.08
PAF1-202ENST00000416728 FERP16591 822 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 LIG3P49916 1009 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 RHDQ02161 417 aa14.55□□□□□ -0.08
PAF1-202ENST00000416728 OGDHQ02218 1023 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms