RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 KIAA2013Q8IYS2 634 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CLEC18CQ8NCF0 446 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 GJC3Q8NFK1 279 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 ASB5Q8WWX0 329 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 ZBTB9Q96C00 473 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 MXRA8Q9BRK3 442 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 HEMGNQ9BXL5 484 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 GLIS2Q9BZE0 524 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 USP44Q9H0E7 712 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 PLEKHA4Q9H4M7 779 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CLK4Q9HAZ1 481 aaKnown RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 SMYD2Q9NRG4 433 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 PCDHA7Q9UN72 937 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 A4GNTQ9UNA3 340 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 SCINQ9Y6U3 715 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 NPIPB11E5RHQ5 1161 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 F5H0A9 414 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 INSIG1O15503 277 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 ASAP2O43150 1006 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 RTN3O95197 1032 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 HOXC6P09630 235 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 UBL4AP11441 157 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CD53P19397 219 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 EDN2P20800 178 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 AGAP20933 346 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CCR9P51686 369 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CLCN5P51795 746 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 NUDT6P53370 316 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 FOXD4Q12950 439 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CTTNQ14247 550 aaKnown RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 MYBPC2Q14324 1141 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 VEPH1Q14D04 833 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 PRAMEF19Q5SWL8 479 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CPLX2Q6PUV4 134 aaKnown RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 DSTYKQ6XUX3 929 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 SLC46A3Q7Z3Q1 461 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 LURAP1LQ8IV03 231 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 MB21D2Q8IYB1 491 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 B4GALNT2Q8NHY0 566 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 METTL6Q8TCB7 284 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 H2AFJQ9BTM1 129 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 EBF3Q9H4W6 596 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 MRPL44Q9H9J2 332 aaKnown RBP3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 CAMK2AQ9UQM7 478 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 NFE2L3Q9Y4A8 694 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 INSL5Q9Y5Q6 135 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 PTGDR2Q9Y5Y4 395 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 PRDM2Q13029 1718 aa3.95□□□□□ -1.78
HMGB1P11-201ENST00000413899 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TTC36A6NLP5 189 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 KDM4EB2RXH2 506 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 ATP2C2O75185 946 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 SEC14L2O76054 403 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 NDUFB4O95168 129 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 MBD4O95243 580 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TBX18O95935 607 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TFPIP10646 304 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 PSMA4P25789 261 aaKnown RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 CDC25AP30304 524 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 AMTP48728 403 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 HDAC4P56524 1084 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 DSC1Q08554 894 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 NEXNQ0ZGT2 675 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TSTQ16762 297 aaKnown RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 GSTA3Q16772 222 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TCTN1Q2MV58 587 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 ATF7IPQ6VMQ6 1270 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 CCDC129Q6ZRS4 1044 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 DHX40Q8IX18 779 aaKnown RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 PARP16Q8N5Y8 322 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 CADM4Q8NFZ8 388 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 NEK9Q8TD19 979 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 ADAMTS15Q8TE58 950 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 OIT3Q8WWZ8 545 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TRIB2Q92519 343 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 FBXL8Q96CD0 374 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 ZC3HAV1LQ96H79 300 aaKnown RBP3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 BBS4Q96RK4 519 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 SIN3AQ96ST3 1273 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 CYSLTR2Q9NS75 346 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TMEM51Q9NW97 253 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 MYO6Q9UM54 1294 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM96BQ9Y3D0 163 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 UTYO14607 1347 aa3.94□□□□□ -1.78
HMGB1P11-201ENST00000413899 TDRD9Q8NDG6 1382 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A1B0GVM2 712 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 TGFB1I1O43294 461 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 KCNAB3O43448 404 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 ITM2AO43736 263 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 MTA2O94776 668 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 ALPLP05186 524 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CLEC3BP05452 202 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 MMP2P08253 660 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CBSLP0DN79 551 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 ETFAP13804 333 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms