RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ZNF235Q14590 738 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 PTPRRQ15256 657 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 UGP2Q16851 508 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMEM52BQ4KMG9 183 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 ERAP2Q6P179 960 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 PGBD5Q8N414 524 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 PCDH19Q8TAB3 1148 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 PDCD6IPQ8WUM4 868 aaKnown RBP10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 TSC1Q92574 1164 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 CENPTQ96BT3 561 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF641Q96N77 438 aaPredicted RBP10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 LENG8Q96PV6 779 aaPredicted RBP10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 RBSNQ9H1K0 784 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 ATP13A3Q9H7F0 1226 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 UVRAGQ9P2Y5 699 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 HYOU1Q9Y4L1 999 aa10.27□□□□□ -0.77
NCKIPSD-202ENST00000413374 RIOK3O14730 519 aaKnown RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 YKT6O15498 198 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 SIGLEC6O43699 453 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PIAS2O75928 621 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PEX11BO96011 259 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PCCBP05166 539 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PROS1P07225 676 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 SERPINA4P29622 427 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 IGFALSP35858 605 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 RABIFP47224 123 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 CSNK1DP48730 415 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 RENBPP51606 427 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 ARSEP51690 589 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 ELP6Q0PNE2 266 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TBX2Q13207 712 aaPredicted RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 C1orf61Q13536 156 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 RFTN1Q14699 578 aaPredicted RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TCEA2Q15560 299 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 ANKRD20A8PQ5CZ79 823 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 MARC1Q5VT66 337 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 DENND2CQ68D51 928 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NCBP2-AS2Q69YL0 99 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 KYAT3Q6YP21 454 aaKnown RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 KANSL1Q7Z3B3 1105 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 ATPAF2Q8N5M1 289 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 LMX1AQ8TE12 382 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 RAPGEF5Q92565 580 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 GATA6Q92908 595 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PSKH2Q96QS6 385 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TUBGCP5Q96RT8 1024 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TCEAL2Q9H3H9 227 aaPredicted RBP10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NOD2Q9HC29 1040 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 NT5MQ9NPB1 228 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 SCUBE2Q9NQ36 999 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 KLF15Q9UIH9 416 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 TFR2Q9UP52 801 aa10.26□□□□□ -0.77
NCKIPSD-202ENST00000413374 PLXNA2O75051 1894 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 A0A0U1RQS6 177 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 SPTY2D1-AS1A0A0U1RR47 76 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 MFSD11O43934 449 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 C6P13671 934 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 JUNDP17535 347 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 CKMT2P17540 419 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 KDELR1P24390 212 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 SERPINB6P35237 376 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 MMP13P45452 471 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 THOP1P52888 689 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 PFN3P60673 137 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 DAB2P98082 770 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 EIF2B5Q13144 721 aaKnown RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 GRM3Q14832 879 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 LRRC14Q15048 493 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 IRF4Q15306 451 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 WSCD2Q2TBF2 565 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 HS1BP3Q53T59 392 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 FAXCQ5TGI0 409 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 BRAT1Q6PJG6 821 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCNI2Q6ZMN8 369 aaPredicted RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 B4GALNT4Q76KP1 1039 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 RD3Q7Z3Z2 195 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 DCP2Q8IU60 420 aaKnown RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 RBFAQ8N0V3 343 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 ASB12Q8WXK4 309 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF599Q96NL3 588 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZMIZ1Q9ULJ6 1067 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 PNMA8BQ9ULN7 279 aaPredicted RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 ATP8A1Q9Y2Q0 1164 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 TTLL3Q9Y4R7 772 aa10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 CNOT1A5YKK6 2376 aaKnown RBP10.25□□□□□ -0.77
NCKIPSD-202ENST00000413374 TSPAN11A1L157 253 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 LRRD1A4D1F6 860 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 FAM221BA6H8Z2 402 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms