RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 AFTPHQ6ULP2 937 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SLC35B2Q8TB61 432 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SNX19Q92543 992 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MAML1Q92585 1016 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SMARCD2Q92925 531 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TRMT2BQ96GJ1 504 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SHDQ96IW2 340 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ZBTB18Q99592 522 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SPATA16Q9BXB7 569 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 RMI1Q9H9A7 625 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CATSPERZQ9NTU4 200 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CD274Q9NZQ7 290 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CYTH4Q9UIA0 394 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 A0A0G2JND7 137 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 C1orf232A0A0U1RR37 186 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SYCE1LA8MT33 242 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 GYG2O15488 501 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 AP2A1O95782 977 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CAPN1P07384 714 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CRABP2P29373 138 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TTPAP49638 278 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 PLIN5Q00G26 463 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ZNF844Q08AG5 666 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SF3A3Q12874 501 aaKnown RBP eCLIP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ITGA9Q13797 1035 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TBCCQ15814 346 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CCDC85BQ15834 202 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 IMPG1Q17R60 797 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MMEL1Q495T6 779 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 RALGPS1Q5JS13 557 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 LRRC8BQ6P9F7 803 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 GPRIN1Q7Z2K8 1008 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TRPM8Q7Z2W7 1104 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 EFL1Q7Z2Z2 1120 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TRIM48Q8IWZ4 208 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 PGAP3Q96FM1 320 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ABCB8Q9NUT2 735 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MARCH5Q9NX47 278 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 IGSF9Q9P2J2 1179 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 RAI2Q9Y5P3 530 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 LINC01553A4QN01 128 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 INSIG1O15503 277 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MPOP05164 745 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 EPHX1P07099 455 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ALADP13716 330 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 DDX5P17844 614 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SSTR1P30872 391 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SLC9A4Q6AI14 798 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SUGP1Q8IWZ8 645 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 NMUR1Q9HB89 426 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 TMEM248Q9NWD8 314 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ERVW-1Q9UQF0 538 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SUPT3HB4E1H0 165 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ALOX15BO15296 676 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 NDUFS2O75306 463 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SUPT3HO75486 399 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MYO1DO94832 1006 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 PTPN3P26045 913 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 MLLT1Q03111 559 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 LRRC14Q15048 493 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 KRT80Q6KB66 452 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CIR1Q86X95 450 aaPredicted RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 DCAF4L2Q8NA75 395 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 ATXN2LQ8WWM7 1075 aaKnown RBP8.59□□□□□ -1.03
SYNE1-211ENST00000413186 SLC2A11Q9BYW1 496 aa8.59□□□□□ -1.03
SYNE1-211ENST00000413186 CCDC162PA2VCL2 907 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TSPAN9O75954 239 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TRIM16O95361 564 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ABL2P42684 1182 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 THOP1P52888 689 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ECT2LQ008S8 904 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 STX3Q13277 289 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 RCN2Q14257 317 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ITPRIPL2Q3MIP1 535 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ZNF567Q8N184 647 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CERS2Q96G23 380 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 FAM161BQ96MY7 647 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CYP2S1Q96SQ9 504 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ZBP1Q9H171 429 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 STOML1Q9UBI4 398 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 EVLQ9UI08 416 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TSR3Q9UJK0 312 aaKnown RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 KIAA1217Q5T5P2 1943 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 IFRD1O00458 451 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 KPNA5O15131 536 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 UGT2B4P06133 528 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 KRT4P19013 534 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CSKP41240 450 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CSE1LP55060 971 aaKnown RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 MBLAC2Q68D91 279 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 NCBP2-AS2Q69YL0 99 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms