RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ECHDC3Q96DC8 303 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 LRIG1Q96JA1 1093 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 NUDCD1Q96RS6 583 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 IL12RB2Q99665 862 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 CPEB1Q9BZB8 566 aaKnown RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 BRD8Q9H0E9 1235 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 CAAP1Q9H8G2 361 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 R3HDM2Q9Y2K5 976 aaKnown RBP7.79□□□□□ -1.16
CPSF4-202ENST00000412686 GPR179Q6PRD1 2367 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 TMEM131Q92545 1883 aa7.79□□□□□ -1.16
CPSF4-202ENST00000412686 A0A1B0GVT2 93 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 A0A1W2PPC4 97 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 LNP1A1A4G5 178 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TSPAN11A1L157 253 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 GOLGA8CPA6NN73 597 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 A8MX80 341 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 UPK3BL1B0FP48 263 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 UPK3BL2E5RIL1 263 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 APOC4-APOC2K7ER74 178 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TRAFD1O14545 582 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ENC1O14682 589 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 PPP1R12AO14974 1030 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 AREL1O15033 823 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RAD51BO15315 384 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 BCAT2O15382 392 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 SLC31A1O15431 190 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 MMP20O60882 483 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 APOC2P02655 101 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 WNT1P04628 370 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 MMP2P08253 660 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 PDHA1P08559 390 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF806P0C7X5 589 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CD27P26842 260 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RBL1P28749 1068 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 SERPINA4P29622 427 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CXCR5P32302 372 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 PTPN7P35236 360 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 HSPA9P38646 679 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RENBPP51606 427 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 COPS2P61201 443 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 AP1S1P61966 158 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 BNC1Q01954 994 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 BCL2L1Q07817 233 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 NSUN2Q08J23 767 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CCDC173Q0VFZ6 552 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 WASHC5Q12768 1159 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RALGDSQ12967 914 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 KLF1Q13351 362 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RPS6KA1Q15418 735 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CSRP2Q16527 193 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 UGP2Q16851 508 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF284Q2VY69 593 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 WDR45BQ5MNZ6 344 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 SYCP2LQ5T4T6 812 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CFAP58Q5T655 872 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 CCDC181Q5TID7 509 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ADAT2Q7Z6V5 191 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TRIM69Q86WT6 500 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 LRRC49Q8IUZ0 686 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 BBS5Q8N3I7 341 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TFB1MQ8WVM0 346 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 FATE1Q969F0 183 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF641Q96N77 438 aaPredicted RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 QKIQ96PU8 341 aaKnown RBP eCLIP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ALS2CR12Q96Q35 445 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TUBGCP5Q96RT8 1024 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 WRAP53Q9BUR4 548 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TLR10Q9BXR5 811 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 POLR1EQ9GZS1 481 aaKnown RBP7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ATP13A3Q9H7F0 1226 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 PREBQ9HCU5 417 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 TM9SF3Q9HD45 589 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 PCDH12Q9NPG4 1184 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 VPS45Q9NRW7 570 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 DKK3Q9UBP4 350 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 ATP8A1Q9Y2Q0 1164 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 COQ6Q9Y2Z9 468 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 RAI2Q9Y5P3 530 aa7.78□□□□□ -1.16
CPSF4-202ENST00000412686 DMDP11532 3685 aa7.77□□□□□ -1.16
CPSF4-202ENST00000412686 OTOGLQ3ZCN5 2332 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 A0A1B0GTW7 788 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 IGLON5A6NGN9 336 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 H0Y8X5 98 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 H7C0C1 242 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 NEMP1O14524 444 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 KCNK3O14649 394 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 KHNYNO15037 678 aaKnown RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 HTRA2O43464 458 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 LATO43561 262 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 NEBLO76041 1014 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 TJP3O95049 919 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PGLSO95336 258 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 PAK4O96013 591 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 MT-CYBP00156 380 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-202ENST00000412686 ALPIP09923 528 aa7.77□□□□□ -1.17
CPSF4-202ENST00000412686 RBP3P10745 1247 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms