RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 WRAP53Q9BUR4 548 aaKnown RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 PCDH12Q9NPG4 1184 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 ABHD10Q9NUJ1 306 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 CTTNBP2NLQ9P2B4 639 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 SPTY2D1-AS1A0A0U1RR47 76 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 SSU72P8A0A1W2PR75 194 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
LSM5-204ENST00000409909 TRIM38O00635 465 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 FPGTO14772 594 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 MAFKO60675 156 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 PROSCO94903 275 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 H2AFZP0C0S5 128 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 SSR1P43307 286 aaKnown RBP17.87■□□□□ 0.45
LSM5-204ENST00000409909 SUOXP51687 545 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 CDH6P55285 790 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 PFN3P60673 137 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 SEMG2Q02383 582 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 LBRQ14739 615 aaKnown RBP17.87■□□□□ 0.45
LSM5-204ENST00000409909 H2AFVQ71UI9 128 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 DENND6BQ8NEG7 585 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 CXorf40AQ8TE69 158 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 ZNF599Q96NL3 588 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 PSKH2Q96QS6 385 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 MBNL1Q9NR56 388 aaKnown RBP17.87■□□□□ 0.45
LSM5-204ENST00000409909 UVRAGQ9P2Y5 699 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 ANKRD36A6QL64 1941 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 LRRK1Q38SD2 2015 aa17.87■□□□□ 0.45
LSM5-204ENST00000409909 ANKRD11Q6UB99 2663 aaPredicted RBP17.86■□□□□ 0.45
LSM5-204ENST00000409909 RIOK3O14730 519 aaKnown RBP17.86■□□□□ 0.45
LSM5-204ENST00000409909 MFAP3LO75121 409 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 PIAS2O75928 621 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 KRT37O76014 449 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 TM7SF2O76062 418 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 PRKCGP05129 697 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 GIMD1P0DJR0 217 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 XPAP23025 273 aaPredicted RBP17.86■□□□□ 0.45
LSM5-204ENST00000409909 IGFALSP35858 605 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 RABIFP47224 123 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 TAS2R40P59535 323 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 KRT81Q14533 505 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 TMCO4Q5TGY1 634 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 BRAT1Q6PJG6 821 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 DHRS13Q6UX07 377 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 PGBD5Q8N414 524 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 CTNNBL1Q8WYA6 563 aaPredicted RBP17.86■□□□□ 0.45
LSM5-204ENST00000409909 IFT43Q96FT9 208 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 DEF6Q9H4E7 631 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 ATP13A3Q9H7F0 1226 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 ZNHIT6Q9NWK9 470 aaKnown RBP17.86■□□□□ 0.45
LSM5-204ENST00000409909 DNAJC28Q9NX36 388 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 SEPT3Q9UH03 358 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 KLF15Q9UIH9 416 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 COQ6Q9Y2Z9 468 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 CHD6Q8TD26 2715 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 KNTC1P50748 2209 aa17.86■□□□□ 0.45
LSM5-204ENST00000409909 ZFHX4Q86UP3 3567 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 TRAFD1O14545 582 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 LAMA5O15230 3695 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 SIGLEC6O43699 453 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 AKR1B10O60218 316 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 CAPNS1P04632 268 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 TMEM253P0C7T8 217 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 SERPINA4P29622 427 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 ACADVLP49748 655 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 SCNN1BP51168 640 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 ELP6Q0PNE2 266 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 TBX2Q13207 712 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 PDE1CQ14123 709 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 DPYSL3Q14195 570 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 SMAD1Q15797 465 aaKnown RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 HADHQ16836 314 aaKnown RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 PROX2Q3B8N5 592 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 TP53I13Q8NBR0 393 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 ECHDC3Q96DC8 303 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 NHEJ1Q9H9Q4 299 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 RCOR3Q9P2K3 495 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 PNMA8BQ9ULN7 279 aaPredicted RBP17.85■□□□□ 0.45
LSM5-204ENST00000409909 PCDHGA1Q9Y5H4 931 aa17.85■□□□□ 0.45
LSM5-204ENST00000409909 SHROOM3Q8TF72 1996 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 CELSR3Q9NYQ7 3312 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 FFAR2O15552 330 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 CSF2P04141 144 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 TPM1P09493 284 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 GJC1P36383 396 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 MMP12P39900 470 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 LIG3P49916 1009 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 RENBPP51606 427 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 BCL2L1Q07817 233 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 EIF2B5Q13144 721 aaKnown RBP17.84■□□□□ 0.45
LSM5-204ENST00000409909 ZNF211Q13398 564 aaPredicted RBP17.84■□□□□ 0.45
LSM5-204ENST00000409909 TSR1Q2NL82 804 aaKnown RBP17.84■□□□□ 0.45
LSM5-204ENST00000409909 CFAP58Q5T655 872 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 OR4C6Q8NH72 309 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 PCDH19Q8TAB3 1148 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 SLC35G2Q8TBE7 412 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 ZMIZ1Q9ULJ6 1067 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 ATP8A1Q9Y2Q0 1164 aa17.84■□□□□ 0.45
LSM5-204ENST00000409909 FAM149AA5PLN7 773 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms