RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 METTL18O95568 372 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 NDUFV2P19404 249 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 SERPINA4P29622 427 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 CD86P42081 329 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 VPS41P49754 854 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 NIPAL4Q0D2K0 466 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 PCGF5Q86SE9 256 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 PRUNE1Q86TP1 453 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 STK40Q8N2I9 435 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 TMIEQ8NEW7 156 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 RLN3Q8WXF3 142 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 ERLEC1Q96DZ1 483 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 ZNF641Q96N77 438 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 RBM15Q96T37 977 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 ERP44Q9BS26 406 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 LRRC1Q9BTT6 524 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 DUSP15Q9H1R2 295 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 MTG2Q9H4K7 406 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
TSPAN4-208ENST00000409531 A0A1W2PQ67 120 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 C1QTNF3-AMACRE9PGA6 284 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 ZNF217O75362 1048 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 LMAN1P49257 510 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 SKOR1P84550 965 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 CDK16Q00536 496 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 SEMA5AQ13591 1074 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 ELF2Q15723 593 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 MAP7D1Q3KQU3 841 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 FAM46CQ5VWP2 391 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 PRPF39Q86UA1 669 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 TMPRSS6Q8IU80 811 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 BBOF1Q8ND07 529 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 OR6K2Q8NGY2 324 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 TADA1Q96BN2 335 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 SNF8Q96H20 258 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 SPACA7Q96KW9 195 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 FSD1LQ9BXM9 530 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 MKRN2Q9H000 416 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 GVINP1Q7Z2Y8 2422 aa16.67■□□□□ 0.26
TSPAN4-208ENST00000409531 TTC24A2A3L6 582 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 SMAPO00193 183 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 RIOK3O14730 519 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 MAP3K13O43283 966 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 LEFTY1O75610 366 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 MMP2P08253 660 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 TEX35Q5T0J7 233 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 FAM182AQ5T1J6 154 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 CFAP58Q5T655 872 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 FAXCQ5TGI0 409 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 ZNF776Q68DI1 518 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 GDPD4Q6W3E5 623 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 KLHDC8BQ8IXV7 354 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 GPR161Q8N6U8 529 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 CHST14Q8NCH0 376 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 GRIN3AQ8TCU5 1115 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 HCAR2Q8TDS4 363 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 OXNAD1Q96HP4 312 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 FAM129BQ96TA1 746 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 RSPH9Q9H1X1 276 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 SUV39H2Q9H5I1 410 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 LRRC40Q9H9A6 602 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 EIF2B3Q9NR50 452 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 WASF2Q9Y6W5 498 aa16.66■□□□□ 0.26
TSPAN4-208ENST00000409531 EML5Q05BV3 1969 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 DNALI1O14645 258 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 PMPCBO75439 489 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 AP2A1O95782 977 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ADH1BP00325 375 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 IL1BP01584 269 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 EPOP01588 193 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 UGT2B4P06133 528 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 APRTP07741 180 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TPSB2P20231 275 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 BCKDHBP21953 392 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 NFKBIAP25963 317 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 DRG2P55039 364 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 SARNPP82979 210 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 CALCOCO2Q13137 446 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TPSAB1Q15661 275 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ARSIQ5FYB1 569 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 DUPD1Q68J44 220 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 NAPEPLDQ6IQ20 393 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 LINC00523Q86TU6 105 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 PPIL6Q8IXY8 311 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 TAB3Q8N5C8 712 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 FRMD1Q8N878 549 aa16.65■□□□□ 0.26
TSPAN4-208ENST00000409531 PIP4K2CQ8TBX8 421 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms