RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 GRIN3AQ8TCU5 1115 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 CPEB1Q9BZB8 566 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 PABPC3Q9H361 631 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 ATP13A3Q9H7F0 1226 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 LRRC4CQ9HCJ2 640 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 BFARQ9NZS9 450 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 DUSP12Q9UNI6 340 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 VCANP13611 3396 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 FZD6O60353 706 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 POP4O95707 220 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 TTC4O95801 387 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 PRKCGP05129 697 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 FGF1P05230 155 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 SERPINA4P29622 427 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 KIR2DL1P43626 348 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 NPY2RP49146 381 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 MSLNQ13421 630 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 ZNF513Q8N8E2 541 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 LRRC39Q96DD0 335 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 STAMBPL1Q96FJ0 436 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 CFAP36Q96G28 342 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 SMIM14Q96QK8 99 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 TUBGCP5Q96RT8 1024 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 EBNA1BP2Q99848 306 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 FUT8Q9BYC5 575 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 PCDHB9Q9Y5E1 797 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 WASF2Q9Y6W5 498 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 ZNF106Q9H2Y7 1883 aaKnown RBP16.96■□□□□ 0.31
SSB-202ENST00000409333 EDDM13A0A1B0GTR0 161 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 AP3B1O00203 1094 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 HTRA2O43464 458 aaPredicted RBP16.96■□□□□ 0.31
SSB-202ENST00000409333 SOCS5O75159 536 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 SIN3BO75182 1162 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 SASH3O75995 380 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 PGLSO95336 258 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 UGT2B4P06133 528 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 CTSLP07711 333 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 CHRM1P11229 460 aaPredicted RBP16.96■□□□□ 0.31
SSB-202ENST00000409333 HNRNPLP14866 589 aaKnown RBP eCLIP16.96■□□□□ 0.31
SSB-202ENST00000409333 CA4P22748 312 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 SSTR1P30872 391 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 TIE1P35590 1138 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 GPX6P59796 221 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 SLC44A4Q53GD3 710 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 TPRG1Q6ZUI0 275 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 UHMK1Q8TAS1 419 aaKnown RBP16.96■□□□□ 0.31
SSB-202ENST00000409333 ZBTB9Q96C00 473 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 RMDN1Q96DB5 314 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 ERLEC1Q96DZ1 483 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 HEPHQ9BQS7 1158 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 IL22Q9GZX6 179 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 PLAC1Q9HBJ0 212 aa16.96■□□□□ 0.31
SSB-202ENST00000409333 ZC3H7BQ9UGR2 993 aaKnown RBP16.96■□□□□ 0.31
SSB-202ENST00000409333 EPHX1P07099 455 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 PIRTP0C851 137 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 CD72P21854 359 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 WASP42768 502 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 RAD51Q06609 339 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 C9orf64Q5T6V5 341 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 ARMC12Q5T9G4 340 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 HDXQ7Z353 690 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 ZSWIM9Q86XI8 627 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 PALM2Q8IXS6 379 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 CHPFQ8IZ52 775 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 TTC25Q96NG3 672 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 ADGRE3Q9BY15 652 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 VPS37BQ9H9H4 285 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 IL36AQ9UHA7 158 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 STON1Q9Y6Q2 735 aa16.95■□□□□ 0.3
SSB-202ENST00000409333 ANKRD66B4E2M5 251 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 LEFTY1O75610 366 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 GLULP15104 373 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 DRD1P21728 446 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 SLC8A1P32418 973 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 GRSF1Q12849 480 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSB-202ENST00000409333 PTPRRQ15256 657 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 QPCTQ16769 361 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 C2orf27AQ580R0 203 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 ARSIQ5FYB1 569 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 CES3Q6UWW8 571 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 UNC5AQ6ZN44 842 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 STK40Q8N2I9 435 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 PIH1D2Q8WWB5 315 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 SUV39H2Q9H5I1 410 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 CHRAC1Q9NRG0 131 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 SAMD15Q9P1V8 674 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 SORCS3Q9UPU3 1222 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 CCDC78A2IDD5 438 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 ALADP13716 330 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 PGAM1P18669 254 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 ENPP2Q13822 863 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 SEPT6Q14141 434 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 GRM3Q14832 879 aa16.94■□□□□ 0.3
SSB-202ENST00000409333 MLF2Q15773 248 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms