RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 BASP1P80723 227 aaKnown RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 CDK18Q07002 472 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 CUL1Q13616 776 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 LAMB3Q13751 1172 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 GAS6Q14393 721 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 RNASEH2BQ5TBB1 312 aaKnown RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 RANBP10Q6VN20 620 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 Q6ZS52 159 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 LRRN4Q8WUT4 740 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 PEX13Q92968 403 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 MRGPRX2Q96LB1 330 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 RBM15Q96T37 977 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 ZDHHC6Q9H6R6 413 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 DYRK4Q9NR20 520 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 PHTF1Q9UMS5 762 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 MTF2Q9Y483 593 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 RAI2Q9Y5P3 530 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 DOCK9Q9BZ29 2069 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 H0Y858 1186 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 STK25O00506 426 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PPFIA2O75334 1257 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 ZNF217O75362 1048 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 APBB3O95704 486 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 MT-CYBP00156 380 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 DNTTP04053 509 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 CTSLP07711 333 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 MCM3P25205 808 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 NEK3P51956 506 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 NRLP54845 237 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 CDH17Q12864 832 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 TRAF2Q12933 501 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 SLC1A5Q15758 541 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 USP45Q70EL2 814 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 B4GALNT4Q76KP1 1039 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 SPATA22Q8NHS9 363 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 CPT1BQ92523 772 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PRCCQ92733 491 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 LRRC39Q96DD0 335 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 TRIM51Q9BSJ1 452 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 LRRC1Q9BTT6 524 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PCED1AQ9H1Q7 454 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PABPC3Q9H361 631 aaKnown RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 KCTD5Q9NXV2 234 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
LIMS2-203ENST00000409254 CACNA1EQ15878 2313 aa13.13□□□□□ -0.31
LIMS2-203ENST00000409254 PIKFYVEQ9Y2I7 2098 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ANKRD66B4E2M5 251 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 CPP00450 1065 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 IL1BP01584 269 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 UGT2B4P06133 528 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ZSCAN5DPP0CG00 497 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ETS1P14921 441 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ZNF30P17039 623 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 MAGEA3P43357 314 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 CXCL12P48061 93 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 NUMBP49757 651 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
LIMS2-203ENST00000409254 PDE1BQ01064 536 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 IZUMO3Q5VZ72 239 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 NEK5Q6P3R8 708 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
LIMS2-203ENST00000409254 TMPRSS6Q8IU80 811 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
LIMS2-203ENST00000409254 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 GRIN3AQ8TCU5 1115 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 SIPA1Q96FS4 1042 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 SCRN2Q96FV2 425 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 NAT9Q9BTE0 207 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
LIMS2-203ENST00000409254 MAGEE1Q9HCI5 957 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-203ENST00000409254 RIMKLBQ9ULI2 386 aa13.12□□□□□ -0.31
LIMS2-203ENST00000409254 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms