RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PHC3Q8NDX5 983 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 OR2W6PQ8NHA6 318 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 ANKRD49Q8WVL7 239 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 ASZ1Q8WWH4 475 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 NDRG1Q92597 394 aaKnown RBP5.05□□□□□ -1.6
SCN3A-203ENST00000409101 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 TDP1Q9NUW8 608 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 PCDHGC5Q9Y5F6 944 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 C9J4A7 227 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 CD3EAPO15446 510 aaKnown RBP5.05□□□□□ -1.6
SCN3A-203ENST00000409101 CYBAP13498 195 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 NOS3P29474 1203 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 HNF4AP41235 474 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 TAS2R50P59544 299 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 NAA20P61599 178 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 ECT2LQ008S8 904 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 MBLAC2Q68D91 279 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 CAPN13Q6MZZ7 669 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-203ENST00000409101 VN1R5Q7Z5H4 357 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 C17orf64Q86WR6 236 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 RIN3Q8TB24 985 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 LMX1AQ8TE12 382 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 CASKIN2Q8WXE0 1202 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 GMLQ99445 158 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 SLC4A5Q9BY07 1137 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 FZD8Q9H461 694 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 FAM83DQ9H4H8 585 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 C3orf14Q9HBI5 128 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 ARHGAP20Q9P2F6 1191 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 SQORQ9Y6N5 450 aa5.05□□□□□ -1.6
SCN3A-203ENST00000409101 M0R3G1 203 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 USP1O94782 785 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SYPP08247 313 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PIRTP0C851 137 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PYGMP11217 842 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ADRA1DP25100 572 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 NDST2P52849 883 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 NOMO3P69849 1222 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MRPS15P82914 257 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ELOAQ14241 798 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SLC29A2Q14542 456 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MFSD5Q6N075 450 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CIR1Q86X95 450 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 XYLT1Q86Y38 959 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 TMEM132CQ8N3T6 1108 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 TEX9Q8N6V9 391 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 AVL9Q8NBF6 648 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 KIAA1143Q96AT1 154 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 KCTD15Q96SI1 283 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 HERC2P3Q9BVR0 1158 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 OSBPL10Q9BXB5 764 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SEMA4BQ9NPR2 832 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 HCN3Q9P1Z3 774 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CNTN3Q9P232 1028 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SLC24A2Q9UI40 661 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SCAMP1O15126 338 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CFHP08603 1231 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 GJA1P17302 382 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 VARSP26640 1264 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 RPL3P39023 403 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MLLT3P42568 568 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CXCR3P49682 368 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 NEK3P51956 506 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 NUP107P57740 925 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 YBEYP58557 167 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 GHRHRQ02643 423 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 OCA2Q04671 838 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 IRF5Q13568 498 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 DLG2Q15700 870 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 N4BP2L1Q5TBK1 243 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 BHLHB9Q6PI77 547 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PACS1Q6VY07 963 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CHSY3Q70JA7 882 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 UBE2R2Q712K3 238 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 TAC4Q86UU9 113 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ZBTB2Q8N680 514 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CCDC185Q8N715 623 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 GLIS3Q8NEA6 775 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ADCY4Q8NFM4 1077 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SELENOMQ8WWX9 145 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 LGMNQ99538 433 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 KCNS3Q9BQ31 491 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 AIF1LQ9BQI0 150 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 B3GNT5Q9BYG0 378 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ELAC1Q9H777 363 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SCOCQ9UIL1 159 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SOX13Q9UN79 622 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CHKBQ9Y259 395 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PEAK1Q9H792 1746 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 A0A096LPK6 155 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MYBPHLA2RUH7 354 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 UBDO15205 165 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SEC24DO94855 1032 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CDK14O94921 469 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 BMPR1AP36894 532 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CTSOP43234 321 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 RXRGP48443 463 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms