RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 NKX6-1P78426 367 aaPredicted RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 EXOSC10Q01780 885 aaKnown RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 POU5F1Q01860 360 aaKnown RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 SYCP1Q15431 976 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 EARS2Q5JPH6 523 aaKnown RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 C20orf194Q5TEA3 1177 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 PIK3R6Q5UE93 754 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 ARHGAP22Q7Z5H3 698 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 DNAAF3Q8N9W5 541 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 CA5BP1Q8WTZ4 195 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 AHCYL2Q96HN2 611 aaKnown RBP8.34□□□□□ -1.07
RPE-203ENST00000408981 ELMO2Q96JJ3 720 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 NEUROD4Q9HD90 331 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 KLQ9UEF7 1012 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 STOML2Q9UJZ1 356 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 CSAG2Q9Y5P2 127 aa8.34□□□□□ -1.07
RPE-203ENST00000408981 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 TISP43B9A030 160 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 ANKRD63C9JTQ0 380 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 E9PMD0 336 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 KLHL41O60662 606 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 IPO13O94829 963 aaKnown RBP8.33□□□□□ -1.08
RPE-203ENST00000408981 SLCO2B1O94956 709 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 UNC5CO95185 931 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 IGFBP2P18065 325 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 BMP6P22004 513 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 HTR1BP28222 390 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 CA5AP35218 305 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 TDGF1P3P51864 188 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 DEFA6Q01524 100 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 SQSTM1Q13501 440 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 LCE2DQ5TA82 110 aaPredicted RBP8.33□□□□□ -1.08
RPE-203ENST00000408981 SHEQ5VZ18 495 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 SLFN12LQ6IEE8 588 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 NYAP1Q6ZVC0 841 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 C1orf186Q6ZWK4 172 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 ZSCAN30Q86W11 494 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 FUKQ8N0W3 1084 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 HJURPQ8NCD3 748 aaPredicted RBP8.33□□□□□ -1.08
RPE-203ENST00000408981 AIFM3Q96NN9 605 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 TRIM56Q9BRZ2 755 aaKnown RBP8.33□□□□□ -1.08
RPE-203ENST00000408981 TIPINQ9BVW5 301 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 HDAC8Q9BY41 377 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 BRD8Q9H0E9 1235 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 CSNK1G1Q9HCP0 422 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 LRFN1Q9P244 771 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 PDP2Q9P2J9 529 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 SLC25A13Q9UJS0 675 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 PLEKHM1Q9Y4G2 1056 aa8.33□□□□□ -1.08
RPE-203ENST00000408981 K7ENM7 598 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 TOR1BO14657 336 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 GADD45BO75293 160 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 DEXIO95424 95 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 LATS1O95835 1130 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 RAF1P04049 648 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CCDC130P13994 396 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CHRNA3P32297 505 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 NEK3P51956 506 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 NDST2P52849 883 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 RBPJQ06330 500 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 DMPKQ09013 629 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 KEAP1Q14145 624 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 MYBPC3Q14896 1274 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 DLG2Q15700 870 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 EFHC1Q5JVL4 640 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CREB3L3Q68CJ9 461 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 FAM199XQ6PEV8 388 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 FAM177A1Q8N128 213 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 GOT1L1Q8NHS2 421 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 DNAJB14Q8TBM8 379 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ADAMTS18Q8TE60 1221 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ASB12Q8WXK4 309 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ERCC4Q92889 916 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 NACC2Q96BF6 587 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CCDC127Q96BQ5 260 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CNDP1Q96KN2 507 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 DDX50Q9BQ39 737 aaKnown RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 AMBRA1Q9C0C7 1298 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 CLEC4MQ9H2X3 399 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 OSBPL3Q9H4L5 887 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ZBTB20Q9HC78 741 aaPredicted RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 KLHL3Q9UH77 587 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 ZNHIT2Q9UHR6 403 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 DNM3Q9UQ16 869 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 FARSAQ9Y285 508 aaKnown RBP8.32□□□□□ -1.08
RPE-203ENST00000408981 FADS3Q9Y5Q0 445 aa8.32□□□□□ -1.08
RPE-203ENST00000408981 BIRC6Q9NR09 4857 aa8.31□□□□□ -1.08
RPE-203ENST00000408981 NCOA6Q14686 2063 aaPredicted RBP8.31□□□□□ -1.08
RPE-203ENST00000408981 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
RPE-203ENST00000408981 NEMP1O14524 444 aa8.31□□□□□ -1.08
RPE-203ENST00000408981 SGSM2O43147 1006 aa8.31□□□□□ -1.08
RPE-203ENST00000408981 IRAK2O43187 625 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms