RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 KRT1P04264 644 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 COMTP21964 271 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 EPHA8P29322 1005 aaPredicted RBP18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 RENBPP51606 427 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 NSUN2Q08J23 767 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 GALNT2Q10471 571 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 PAFAH1B3Q15102 231 aaKnown RBP18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 SPA17Q15506 151 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 CCDC157Q569K6 752 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 MARC1Q5VT66 337 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 ERAP2Q6P179 960 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 BRAT1Q6PJG6 821 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 SAP25Q8TEE9 199 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 FAF2Q96CS3 445 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 PANX2Q96RD6 677 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 ERVMER34-1Q9H9K5 563 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 NOD2Q9HC29 1040 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 PCDHGC4Q9Y5F7 938 aa18.32■□□□□ 0.52
PTPRN2-204ENST00000404321 A8MX80 341 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 FPGTO14772 594 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 SPOPO43791 374 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 TM7SF2O76062 418 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 ATXN1LP0C7T5 689 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 FTH1P19P0C7X4 201 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 CYLC1P35663 651 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 GARSP41250 739 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 MMP13P45452 471 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 AP1S1P61966 158 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 ELP6Q0PNE2 266 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 BBS5Q8N3I7 341 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 EID2Q8N6I1 236 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 BAHD1Q8TBE0 780 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 PDCD6IPQ8WUM4 868 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 RNF25Q96BH1 459 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 NT5MQ9NPB1 228 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 SCUBE2Q9NQ36 999 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 ATP8A1Q9Y2Q0 1164 aa18.31■□□□□ 0.52
PTPRN2-204ENST00000404321 C3orf70A6NLC5 250 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 RIOK3O14730 519 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 LCA5LO95447 670 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 RXRGP48443 463 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 ITKQ08881 620 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 SLC10A2Q12908 348 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TMEM52BQ4KMG9 183 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TPRG1LQ5T0D9 272 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 FAM182AQ5T1J6 154 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 KYAT3Q6YP21 454 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 SLCO6A1Q86UG4 719 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CHCHD4Q8N4Q1 142 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 OXR1Q8N573 874 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 HCAR2Q8TDS4 363 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 ECHDC3Q96DC8 303 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CNTNAP3BQ96NU0 1288 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 RNF157Q96PX1 679 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 NUDCD1Q96RS6 583 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CDC6Q99741 560 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 MGME1Q9BQP7 344 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CNTNAP3Q9BZ76 1288 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 MBNL1Q9NR56 388 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TTLL3Q9Y4R7 772 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 HS3ST3A1Q9Y663 406 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TMEM131Q92545 1883 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 DOCK9Q9BZ29 2069 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TRAFD1O14545 582 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 YKT6O15498 198 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 C6P13671 934 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CR2P20023 1033 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 IGFALSP35858 605 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 MMP12P39900 470 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 LIG3P49916 1009 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 SUOXP51687 545 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 DYNLT1P63172 113 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 PDE1CQ14123 709 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TCEAL1Q15170 157 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 LLGL1Q15334 1064 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 INAVAQ3KP66 663 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 ODF2Q5BJF6 829 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 ZSCAN30Q86W11 494 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 SPC24Q8NBT2 197 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CCNYQ8ND76 341 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 ASB12Q8WXK4 309 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CENPTQ96BT3 561 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 LENG8Q96PV6 779 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 SCNM1Q9BWG6 230 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 UCKL1Q9NWZ5 548 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 DNAJC28Q9NX36 388 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 DTLQ9NZJ0 730 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 FTSJ1Q9UET6 329 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 HEY1Q9Y5J3 304 aa18.3■□□□□ 0.52
PTPRN2-204ENST00000404321 CABIN1Q9Y6J0 2220 aa18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 NDUFA10O95299 355 aa18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 HSPA9P38646 679 aaKnown RBP18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 SLC1A1P43005 524 aa18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 SHC2P98077 582 aa18.29■□□□□ 0.52
PTPRN2-204ENST00000404321 TRAF2Q12933 501 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms