RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 IL23RQ5VWK5 629 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 PKN3Q6P5Z2 889 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 CCNYL1Q8N7R7 359 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 NXNL1Q96CM4 212 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 ZNF597Q96LX8 424 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 TIMMDC1Q9NPL8 285 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 UBP1Q9NZI7 540 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 SARDHQ9UL12 918 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 TMEM233B4DJY2 109 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 JCHAINP01591 159 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 STMN1P16949 149 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 DAOAP59103 153 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 TXNL4AP83876 142 aaKnown RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 SOX4Q06945 474 aaPredicted RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 ARL13BQ3SXY8 428 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 CEP97Q8IW35 865 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 IRGQQ8WZA9 623 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 ATP6V1E2Q96A05 226 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 EME1Q96AY2 570 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 MRPL57Q9BQC6 102 aaKnown RBP20■□□□□ 0.79
CCDC47-202ENST00000403162 SEZ6LQ9BYH1 1024 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 ULBP1Q9BZM6 244 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 ADA2Q9NZK5 511 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 AP4S1Q9Y587 144 aa20■□□□□ 0.79
CCDC47-202ENST00000403162 NUP205Q92621 2012 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 MYOCOSA0A1B0GUC4 107 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 FAM95CA0A1B0GW59 222 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 TCN1P20061 433 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 GJA8P48165 433 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 MNX1P50219 401 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 ATN1P54259 1190 aaPredicted RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 INHBCP55103 352 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 LILRA4P59901 499 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 ZNF33AQ06730 810 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 MGAT3Q09327 533 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 STX5Q13190 355 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 MAPRE2Q15555 327 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 TRIM71Q2Q1W2 868 aaKnown RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 GK5Q6ZS86 529 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 MFSD6LQ8IWD5 586 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 FAM156AQ8NDB6 213 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 DUS3LQ96G46 650 aaKnown RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 DNAJC1Q96KC8 554 aaKnown RBP19.99■□□□□ 0.79
CCDC47-202ENST00000403162 TSGA13Q96PP4 275 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 HAUS8Q9BT25 410 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 GOLGA2P5Q9HBQ8 144 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 KLK14Q9P0G3 267 aa19.99■□□□□ 0.79
CCDC47-202ENST00000403162 YJEFN3A6XGL0 299 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 KCNU1A8MYU2 1149 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 MAP3K7CLP57077 242 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 RHDQ02161 417 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 TRAP1Q12931 704 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 TBC1D25Q3MII6 688 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 TXNDC5Q8NBS9 432 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 FAR2Q96K12 515 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 MRM3Q9HC36 420 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 HACD3Q9P035 362 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 A0A087X1B8 175 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 TRIM24O15164 1050 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 FAM200BP0CF97 657 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 KPNA2P52292 529 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 MPP1Q00013 466 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 ZNF460Q14592 562 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 AMIGO2Q86SJ2 522 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 DENND6AQ8IWF6 608 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 DIS3LQ8TF46 1054 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 MED10Q9BTT4 135 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 OSBPL11Q9BXB4 747 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 POMKQ9H5K3 350 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 SUDS3Q9H7L9 328 aaPredicted RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 RRN3Q9NYV6 651 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 CIDEBQ9UHD4 219 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 PIN4Q9Y237 131 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 AAR2Q9Y312 384 aaKnown RBP19.98■□□□□ 0.79
CCDC47-202ENST00000403162 RNF11Q9Y3C5 154 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 CEPT1Q9Y6K0 416 aa19.98■□□□□ 0.79
CCDC47-202ENST00000403162 CCDC78A2IDD5 438 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 C7orf72A4D263 438 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 ATP5F1P24539 256 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 AXLP30530 894 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 ARCN1P48444 511 aaKnown RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 USP46P62068 366 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 HPCAP84074 193 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 LRP8Q14114 963 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 SQLEQ14534 574 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 PSMD5Q16401 504 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 KLC3Q6P597 504 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 TRIM67Q6ZTA4 783 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CCDC117Q8IWD4 279 aaPredicted RBP19.97■□□□□ 0.79
CCDC47-202ENST00000403162 FAM126BQ8IXS8 530 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 RIN3Q8TB24 985 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 HMGCLL1Q8TB92 370 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 OMDQ99983 421 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 TBL1YQ9BQ87 522 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 COLEC11Q9BWP8 271 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CNGB3Q9NQW8 809 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 CACNA2D2Q9NY47 1150 aa19.97■□□□□ 0.79
CCDC47-202ENST00000403162 E7ENX8 843 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms