RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 DENND6BQ8NEG7 585 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CXorf40AQ8TE69 158 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 WRAP53Q9BUR4 548 aaKnown RBP16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CINPQ9BW66 212 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-203ENST00000400772 PCDH12Q9NPG4 1184 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 MBNL1Q9NR56 388 aaKnown RBP16.01■□□□□ 0.15
ATG4B-203ENST00000400772 KLF15Q9UIH9 416 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CACNA1BQ00975 2339 aa16.01■□□□□ 0.15
ATG4B-203ENST00000400772 CEP295Q9C0D2 2601 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 TDRD6O60522 2096 aaKnown RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 SSU72P8A0A1W2PR75 194 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 TTC24A2A3L6 582 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 TMEM8BA6NDV4 472 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 RIOK3O14730 519 aaKnown RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 SIGLEC6O43699 453 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 MAFKO60675 156 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 PIAS2O75928 621 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 TM7SF2O76062 418 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 PRKCGP05129 697 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 IGFALSP35858 605 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 EIF2B5Q13144 721 aaKnown RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 MMRN1Q13201 1228 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 PDE1CQ14123 709 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 TRIM14Q14142 442 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 LBRQ14739 615 aaKnown RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 TMCO3Q6UWJ1 677 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 TP53I13Q8NBR0 393 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 ECHDC3Q96DC8 303 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 ZNF599Q96NL3 588 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 PSKH2Q96QS6 385 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 CHP1Q99653 195 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 ABHD10Q9NUJ1 306 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 CTTNBP2NLQ9P2B4 639 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 UVRAGQ9P2Y5 699 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 PNMA8BQ9ULN7 279 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 AKAP13Q12802 2813 aa16■□□□□ 0.15
ATG4B-203ENST00000400772 KMT2BQ9UMN6 2715 aaPredicted RBP16■□□□□ 0.15
ATG4B-203ENST00000400772 FAM149AA5PLN7 773 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 TAF4O00268 1085 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 PROSCO94903 275 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 CSF2P04141 144 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 C1SP09871 688 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 H2AFZP0C0S5 128 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 CKMT2P17540 419 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 CR2P20023 1033 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 XPAP23025 273 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-203ENST00000400772 SCNN1BP51168 640 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 ADKP55263 362 aaKnown RBP15.99■□□□□ 0.15
ATG4B-203ENST00000400772 CDH6P55285 790 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 TAS2R40P59535 323 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 SEMG2Q02383 582 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 ELP6Q0PNE2 266 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 ZNF211Q13398 564 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-203ENST00000400772 CAMK2BQ13554 666 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 KRT81Q14533 505 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 BRAT1Q6PJG6 821 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 H2AFVQ71UI9 128 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 PGBD5Q8N414 524 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 ATP13A3Q9H7F0 1226 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 DNAJC28Q9NX36 388 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 SEPT3Q9UH03 358 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 COQ6Q9Y2Z9 468 aa15.99■□□□□ 0.15
ATG4B-203ENST00000400772 MFAP3LO75121 409 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 RFPL3O75679 317 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 TMEM253P0C7T8 217 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 NME1P15531 152 aaKnown RBP15.98■□□□□ 0.15
ATG4B-203ENST00000400772 SERPINA4P29622 427 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 MMP12P39900 470 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 SSR1P43307 286 aaKnown RBP15.98■□□□□ 0.15
ATG4B-203ENST00000400772 RENBPP51606 427 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 CLDN6P56747 220 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 DPYSL3Q14195 570 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 HADHQ16836 314 aaKnown RBP15.98■□□□□ 0.15
ATG4B-203ENST00000400772 PARGQ86W56 976 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 GALNT15Q8N3T1 639 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 OR4C6Q8NH72 309 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 ZCCHC14Q8WYQ9 949 aaKnown RBP15.98■□□□□ 0.15
ATG4B-203ENST00000400772 RCOR3Q9P2K3 495 aaPredicted RBP15.98■□□□□ 0.15
ATG4B-203ENST00000400772 USP24Q9UPU5 2620 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 ATP8A1Q9Y2Q0 1164 aa15.98■□□□□ 0.15
ATG4B-203ENST00000400772 LRRK1Q38SD2 2015 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 GOLGA4Q13439 2230 aaKnown RBP15.97■□□□□ 0.15
ATG4B-203ENST00000400772 SCAMP1O15126 338 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 FFAR2O15552 330 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 NEBLO76041 1014 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 C6P13671 934 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 ACP1P24666 158 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 LIG3P49916 1009 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 AP1S1P61966 158 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 HNRNPKP61978 463 aaKnown RBP eCLIP15.97■□□□□ 0.156e-18■■■■□ 19.6
ATG4B-203ENST00000400772 YPEL5P62699 121 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 BCL2L1Q07817 233 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 RALGDSQ12967 914 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 TBX2Q13207 712 aaPredicted RBP15.97■□□□□ 0.15
ATG4B-203ENST00000400772 IRF4Q15306 451 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 WSCD2Q2TBF2 565 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 ERAP2Q6P179 960 aa15.97■□□□□ 0.15
ATG4B-203ENST00000400772 PCDH19Q8TAB3 1148 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms