RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 VDRP11473 427 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 RORAP35398 523 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 ALDH7A1P49419 539 aaKnown RBP8.43□□□□□ -1.06
CHD8-201ENST00000399982 ACOX1Q15067 660 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 RAP1GAP2Q684P5 730 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 ZNF571Q7Z3V5 609 aaPredicted RBP8.43□□□□□ -1.06
CHD8-201ENST00000399982 GJD3Q8N144 294 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 ATL1Q8WXF7 558 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 OR2B2Q9GZK3 357 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 ZFYVE28Q9HCC9 887 aa8.43□□□□□ -1.06
CHD8-201ENST00000399982 PP2D1A8MPX8 630 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 FOXN3O00409 490 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 NMT2O60551 498 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MBL2P11226 248 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 CACUL1Q86Y37 369 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 CPT1CQ8TCG5 803 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 AKAP1Q92667 903 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHD8-201ENST00000399982 RHBDF1Q96CC6 855 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 CENPNQ96H22 339 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 DHRS7Q9Y394 339 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MTA2O94776 668 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 HSD17B2P37059 387 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 SLC11A2P49281 568 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PITPNAQ00169 270 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ECT2LQ008S8 904 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 IL18R1Q13478 541 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 FAM131AQ6UXB0 335 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PPP3R2Q96LZ3 170 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 HIPK3Q9H422 1215 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 WDCPQ9H6R7 721 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MAT2BQ9NZL9 334 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 LGALS13Q9UHV8 139 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 C9IYK1 514 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GLP2RO95838 553 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GIMD1P0DJR0 217 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 FDPSP14324 419 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 RPA3P35244 121 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 GJA9P57773 515 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 SSTP61278 116 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GOLGA7BQ2TAP0 167 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 RBM48Q5RL73 367 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 OGFRL1Q5TC84 451 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 KCNK18Q7Z418 384 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ADGRG2Q8IZP9 1017 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ARMC10Q8N2F6 343 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 STK40Q8N2I9 435 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 FBXO39Q8N4B4 442 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ATP6V0D2Q8N8Y2 350 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 C9orf43Q8TAL5 461 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 ACTL9Q8TC94 416 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ROPN1LQ96C74 230 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 COPS4Q9BT78 406 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 KAT8Q9H7Z6 458 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 PLA2G4CQ9UP65 541 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 DUSP10Q9Y6W6 482 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ASLP04424 464 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GSTT2BP0CG30 244 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ITGA4P13612 1032 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 SKP1P63208 163 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ZNHIT3Q15649 155 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 PLEKHG6Q3KR16 790 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 TRABD2AQ86V40 505 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 OR2T34Q8NGX1 318 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 OR2T3Q8NH03 318 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 QRFPRQ96P65 431 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GTPBP2Q9BX10 602 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 NUP50Q9UKX7 468 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 OGDHLQ9ULD0 1010 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GNEQ9Y223 722 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 PCDHB9Q9Y5E1 797 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ZNF609O15014 1411 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 METP08581 1390 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 A0A075B6Q4 140 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 EML1O00423 815 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 TPTEP56180 551 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PIGWQ7Z7B1 504 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ZZZ3Q8IYH5 903 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PHF12Q96QT6 1004 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MRPL57Q9BQC6 102 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 INTS10Q9NVR2 710 aaKnown RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 LRRC42Q9Y546 428 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MED24O75448 989 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 ETS2P15036 469 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 AADACL4Q5VUY2 407 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 BHLHB9Q6PI77 547 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 LHFPL3Q86UP9 236 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 GPALPP1Q8IXQ4 340 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 UBA3Q8TBC4 463 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 MCOLN3Q8TDD5 553 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 SEMA4DQ92854 862 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PCDH12Q9NPG4 1184 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 TRPV5Q9NQA5 729 aa8.42□□□□□ -1.06
CHD8-201ENST00000399982 PRMT7Q9NVM4 692 aaPredicted RBP8.42□□□□□ -1.06
CHD8-201ENST00000399982 PNPLA6Q8IY17 1366 aa8.41□□□□□ -1.06
CHD8-201ENST00000399982 ZSCAN5BA6NJL1 495 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms