RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PLCH2O75038 1416 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DNM1LO00429 736 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 LILRB5O75023 590 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 PCSK1P29120 753 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 IREB2P48200 963 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF33AQ06730 810 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DSELQ8IZU8 1212 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ARL5BQ96KC2 179 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 COG8Q96MW5 612 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TUBA1CQ9BQE3 449 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 EIF2B4Q9UI10 523 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DMRT2Q9Y5R5 561 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SERPINA4P29622 427 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 MPIP34949 423 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TRIM40Q6P9F5 258 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 WDR53Q7Z5U6 358 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 DNAJB3Q8WWF6 145 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 TNPO3Q9Y5L0 923 aaKnown RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SDR42E2A6NKP2 422 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 CCRL2O00421 344 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 GLP2RO95838 553 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 COX4I1P13073 169 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ABL2P42684 1182 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 LRP8Q14114 963 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 GET4Q7L5D6 327 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SLCO6A1Q86UG4 719 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 ZFP57Q9NU63 452 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 HEY2Q9UBP5 337 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC27A6Q9Y2P4 619 aa8.64□□□□□ -1.03
CACNA1C-220ENST00000399655 FLRT2O43155 660 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ASLP04424 464 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 BMPR2Q13873 1038 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CBWD2Q8IUF1 395 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SNX33Q8WV41 574 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 APOPT1Q96IL0 206 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 HSPB11Q9Y547 144 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PDPK1O15530 556 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 VNN2O95498 520 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 DPP7Q9UHL4 492 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ANKDD1BA6NHY2 528 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 NR3C1P04150 777 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 DPEP1P16444 411 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PRPH2P23942 346 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CCR3P51677 355 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TRIM28Q13263 835 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CYP2A13Q16696 494 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 IL1RAPQ9NPH3 570 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C14orf105Q9NVL8 296 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 THAP1Q9NVV9 213 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 NCAM2O15394 837 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 GLDCP23378 1020 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF425Q6IV72 752 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ASB18Q6ZVZ8 466 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MCOLN2Q8IZK6 566 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SULT4A1Q9BR01 284 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 GAREM1Q9H706 876 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 BRD9Q9H8M2 597 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C3orf14Q9HBI5 128 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CD93Q9NPY3 652 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SPIN1Q9Y657 262 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 NADKO95544 446 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 LINGO3P0C6S8 592 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PRKCAP17252 672 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MAPK9P45984 424 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM132DQ14C87 1099 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PDPK2PQ6A1A2 396 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF529Q6P280 563 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZER1Q7Z7L7 766 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CAVIN3Q969G5 261 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ACOX2Q99424 681 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ARL8BQ9NVJ2 186 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 HMGXB4Q9UGU5 601 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 OR10H1Q9Y4A9 318 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF407Q9C0G0 2248 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CARMIL3Q8ND23 1372 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 AIREO43918 545 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 FASTKQ14296 549 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF512Q96ME7 567 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC22A4Q9H015 551 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PTPRGP23470 1445 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PRKCBP05771 671 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RPL10AP62906 217 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC9B1Q4ZJI4 515 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CDYL2Q8N8U2 506 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 OR56B2PQ8NGI1 322 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PSD2Q9BQI7 771 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SEC14L4Q9UDX3 406 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 USP18Q9UMW8 372 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C15orf41Q9Y2V0 281 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 NR2E1Q9Y466 385 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CACNA1DQ01668 2161 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PLA2G6O60733 806 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms