RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 CTTNBP2NLQ9P2B4 639 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 SEPT3Q9UH03 358 aa15.02■□□□□ -0
SMIM11A-203ENST00000399299 CHD6Q8TD26 2715 aa15.02□□□□□ -0.01
SMIM11A-203ENST00000399299 WDFY3Q8IZQ1 3526 aa15.02□□□□□ -0.01
SMIM11A-203ENST00000399299 DMXL2Q8TDJ6 3036 aa15.02□□□□□ -0.01
SMIM11A-203ENST00000399299 FREM2Q5SZK8 3169 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 GOLGA8CPA6NN73 597 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 TOR1BO14657 336 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 MFAP3LO75121 409 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 PIAS2O75928 621 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 PROSCO94903 275 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 DGKAP23743 735 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 MAN1A1P33908 653 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 HSPA9P38646 679 aaKnown RBP15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 AP1S1P61966 158 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 HNRNPKP61978 463 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 FZD2Q14332 565 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 LBRQ14739 615 aaKnown RBP15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 AGERQ15109 404 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 LRRC73Q5JTD7 316 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 CFAP58Q5T655 872 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 CCNI2Q6ZMN8 369 aaPredicted RBP15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 LRRC49Q8IUZ0 686 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 TP53INP2Q8IXH6 220 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 SLC25A45Q8N413 288 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 SPOCK2Q92563 424 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 ECHDC3Q96DC8 303 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 DEF6Q9H4E7 631 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 SHROOM3Q8TF72 1996 aa15.01□□□□□ -0.01
SMIM11A-203ENST00000399299 CFAP69A5D8W1 941 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 RIOK3O14730 519 aaKnown RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 MUSKO15146 869 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 AKR1B10O60218 316 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 MAFKO60675 156 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 MMP20O60882 483 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 SDC3O75056 442 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 RFPL3O75679 317 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 PEX11BO96011 259 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 TMEM253P0C7T8 217 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 NME1P15531 152 aaKnown RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 IL4RP24394 825 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 MMP12P39900 470 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ACADVLP49748 655 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ARSEP51690 589 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 CDH6P55285 790 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 YPEL5P62699 121 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 BCL2L1Q07817 233 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 SLC10A7Q0GE19 358 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ZNF211Q13398 564 aaPredicted RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 ILKQ13418 452 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 KRT81Q14533 505 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ZNF235Q14590 738 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 SMAD1Q15797 465 aaKnown RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 PROX2Q3B8N5 592 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ERAP2Q6P179 960 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 PARGQ86W56 976 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 CAMK1DQ8IU85 385 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 CNGA4Q8IV77 575 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ATPAF2Q8N5M1 289 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 TP53I13Q8NBR0 393 aaPredicted RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 OR4C6Q8NH72 309 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ZNF670Q9BS34 389 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 PACSIN1Q9BY11 444 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 PCDH12Q9NPG4 1184 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 ATP8A1Q9Y2Q0 1164 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 GOLGA4Q13439 2230 aaKnown RBP15□□□□□ -0.01
SMIM11A-203ENST00000399299 PKD1L2Q7Z442 2459 aa15□□□□□ -0.01
SMIM11A-203ENST00000399299 DSPP15924 2871 aaKnown RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 H3BM21 787 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 TRAFD1O14545 582 aaPredicted RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 CSF2P04141 144 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 CKMT2P17540 419 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 ITIH2P19823 946 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 IGFALSP35858 605 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 SSR1P43307 286 aaKnown RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 POLR2LP62875 67 aaKnown RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 DNAJC3Q13217 504 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 PDE1CQ14123 709 aaPredicted RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 DPYSL3Q14195 570 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 PTK2BQ14289 1009 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 PDK2Q15119 407 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 HS1BP3Q53T59 392 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 RALGPS1Q5JS13 557 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 SARM1Q6SZW1 724 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 ZSWIM9Q86XI8 627 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 BBS5Q8N3I7 341 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 WRAP53Q9BUR4 548 aaKnown RBP14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 UCKL1Q9NWZ5 548 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 DNAJC28Q9NX36 388 aa14.99□□□□□ -0.01
SMIM11A-203ENST00000399299 A0A1W2PQ67 120 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 NEMP2A6NFY4 417 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 TRIM38O00635 465 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 SCAMP1O15126 338 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 SIGLEC6O43699 453 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 SOCS5O75159 536 aa14.98□□□□□ -0.01
SMIM11A-203ENST00000399299 CAPNS1P04632 268 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms