RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MAN1A2O60476 641 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 EEF1DP29692 281 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 HOXD13P35453 343 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SLCO1A2P46721 670 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ARFIP2P53365 341 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ELF3P78545 371 aaPredicted RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ARF5P84085 180 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 OCRLQ01968 901 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 STRN3Q13033 797 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 CTTNQ14247 550 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 TRIM25Q14258 630 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNAB1Q14722 419 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 DHCR24Q15392 516 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ANKRD20A4Q4UJ75 823 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 CACHD1Q5VU97 1274 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 USP43Q70EL4 1123 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ELMOD2Q8IZ81 293 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 BBS5Q8N3I7 341 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF366Q8N895 744 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PIGOQ8TEQ8 1089 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 THAP3Q8WTV1 239 aaPredicted RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF317Q96PQ6 595 aaPredicted RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PHOX2BQ99453 314 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNK9Q9NPC2 374 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SYBUQ9NX95 663 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 CFAP97Q9P2B7 532 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 USP15Q9Y4E8 981 aaPredicted RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PPIP5K2O43314 1243 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SYNCRIPO60506 623 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SHBGP04278 402 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 TRIM49P0CI25 452 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 TRIM49CP0CI26 452 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 CHRM3P20309 590 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 EPHX2P34913 555 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 LBX1P52954 281 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 YWHAZP63104 245 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 FCHO2Q0JRZ9 810 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 DCTN2Q13561 401 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 LASP1Q14847 261 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 LSM12Q3MHD2 195 aaKnown RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 MAP3K21Q5TCX8 1036 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SYDE1Q6ZW31 735 aaPredicted RBP6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 UTS2BQ765I0 119 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 NECAB2Q7Z6G3 386 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PIGWQ7Z7B1 504 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ADGRG2Q8IZP9 1017 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 C18orf8Q96DM3 657 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 ARHGEF26Q96DR7 871 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 MAGED4Q96JG8 741 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 SERPINB12Q96P63 405 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 TBC1D10AQ9BXI6 508 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 GPR62Q9BZJ7 368 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 DPEP3Q9H4B8 488 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 PTTG2Q9NZH5 202 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 KLHL14Q9P2G3 628 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 LRCH1Q9Y2L9 728 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 DTNAQ9Y4J8 743 aa6.65□□□□□ -1.35
TM9SF4-202ENST00000398022 GPR171O14626 319 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PPM1BO75688 479 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TPBGLP0DKB5 382 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ITGB8P26012 769 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 COILP38432 576 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ACAA2P42765 397 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 RPL21P46778 160 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 HARS2P49590 506 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CAV1Q03135 178 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 USP10Q14694 798 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 MFSD5Q6N075 450 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TMEM179Q6ZVK1 233 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PYROXD2Q8N2H3 581 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 KLHL36Q8N4N3 616 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 KLHL29Q96CT2 875 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PHF12Q96QT6 1004 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 LMF1Q96S06 567 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 RANBP9Q96S59 729 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TIPINQ9BVW5 301 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 IMPG2Q9BZV3 1241 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 GRIP2Q9C0E4 1043 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TIMMDC1Q9NPL8 285 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NINJ2Q9NZG7 142 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 PI4KBQ9UBF8 816 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 AJAP1Q9UKB5 411 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 FRMPD3Q5JV73 1810 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 CDK5RAP2Q96SN8 1893 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TRBV23OR9-2A0A075B6M9 112 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 XKRY2A2RUG3 117 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM86B1E9PN63 330 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 O00370 1275 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NDUFS6O75380 124 aaKnown RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 SOAT2O75908 522 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 MYO1DO94832 1006 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM86B2P0C5J1 330 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 TCN1P20061 433 aaPredicted RBP6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 STX2P32856 288 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 NUDT1P36639 197 aa6.64□□□□□ -1.35
TM9SF4-202ENST00000398022 ARCN1P48444 511 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms