RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 MEF2AQ02078 507 aaPredicted RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PTH1RQ03431 593 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 SLFN5Q08AF3 891 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PGM5Q15124 567 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 CEBPEQ15744 281 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF750Q32MQ0 723 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF792Q3KQV3 632 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGAP40Q5TG30 622 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 AFTPHQ6ULP2 937 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 C20orf204Q6ZNR8 217 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 CAMKMTQ7Z624 323 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 AACSQ86V21 672 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 VASH2Q86V25 355 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 TICAM1Q8IUC6 712 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 KDM8Q8N371 416 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 BBS5Q8N3I7 341 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 SMG8Q8ND04 991 aaKnown RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 RNFT2Q96EX2 444 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 PKP2Q99959 881 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF350Q9GZX5 532 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 FAM212BQ9NTI7 297 aaPredicted RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ERVK13-1Q9NX77 482 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 DNMT3BQ9UBC3 853 aaKnown RBP6.88□□□□□ -1.31
SMCO1-201ENST00000397537 TRPS1Q9UHF7 1281 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 STX8Q9UNK0 236 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 SSX2IPQ9Y2D8 614 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 ACTL7AQ9Y615 435 aa6.88□□□□□ -1.31
SMCO1-201ENST00000397537 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ANXA2P2A6NMY6 339 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 BUB1O43683 1085 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 LIASO43766 372 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NUDT21O43809 227 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CACNG3O60359 315 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 MTX2O75431 263 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 BAG4O95429 457 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ABHD2P08910 425 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 MAP2K2P36507 400 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FASLGP48023 281 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 SNU13P55769 128 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FAM3BP58499 235 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 SP2Q02086 613 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FHL3Q13643 280 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGEF6Q15052 776 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TAZQ16635 292 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CLPPQ16740 277 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PLA1AQ53H76 456 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 IGSF11Q5DX21 431 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBXO48Q5FWF7 155 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NOMO2Q5JPE7 1267 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NEK5Q6P3R8 708 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 WFDC8Q8IUA0 241 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF679Q8IYX0 411 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PTGR2Q8N8N7 351 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OR7G3Q8NG95 312 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OR7D4Q8NG98 312 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OR13C2Q8NGS9 318 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OR2T34Q8NGX1 318 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 SMARCE1Q969G3 411 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 HDAC11Q96DB2 347 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CD180Q99467 661 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TLR10Q9BXR5 811 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 HAPLN2Q9GZV7 340 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CARD9Q9H257 536 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 IKZF4Q9H2S9 585 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBRSL1Q9HCM7 1045 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PRMT8Q9NR22 394 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 LANCL2Q9NS86 450 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 RRP7BPQ9NSQ0 103 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBXO34Q9NWN3 711 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OGFRQ9NZT2 677 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CHMP5Q9NZZ3 219 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 DNAJB11Q9UBS4 358 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 MALT1Q9UDY8 824 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 DRG1Q9Y295 367 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CDC42BPGQ6DT37 1551 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TEX13CA0A0J9YWL9 993 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 A0A1B0GWJ7 208 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PRR5-ARHGAP8B1AHC4 643 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 HGSO14964 777 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CETN3O15182 167 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 WISP1O95388 367 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 MT-ATP6P00846 226 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC192P0DO97 292 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NR2F2P24468 414 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CD27P26842 260 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 SFNP31947 248 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CPOXP36551 454 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 USP8P40818 1118 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 RAB28P51157 221 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ST8SIA6P61647 398 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NIPAL4Q0D2K0 466 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 DBPQ10586 325 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 DDX39BQ13838 428 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PFKFB3Q16875 520 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms