RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MAPK8P45983 427 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 CSNK1DP48730 415 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 GPX6P59796 221 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 PTPRRQ15256 657 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 POM121L1PQ3SYA9 428 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 RALGPS1Q5JS13 557 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 RALGPS2Q86X27 583 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-204ENST00000397443 ZNF513Q8N8E2 541 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-204ENST00000397443 BLOC1S5Q8TDH9 187 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 TRPV5Q9NQA5 729 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 MYLKQ15746 1914 aa21.36■■□□□ 1.01
CPNE1-204ENST00000397443 COL4A2P08572 1712 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-204ENST00000397443 K7EQS6 105 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 PIAS1O75925 651 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 POP4O95707 220 aaKnown RBP21.35■■□□□ 1.01
CPNE1-204ENST00000397443 EGFP01133 1207 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 CA4P22748 312 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 PRKCHP24723 683 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 SERPINA4P29622 427 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 NPY2RP49146 381 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 EPHB1P54762 984 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 PFKPQ01813 784 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 RAD51Q06609 339 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 C2orf27AQ580R0 203 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 C3orf62Q6ZUJ4 267 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 CHPFQ8IZ52 775 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 IL22Q9GZX6 179 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 C8orf33Q9H7E9 229 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-204ENST00000397443 CHRAC1Q9NRG0 131 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 VCANP13611 3396 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 SLC4A1P02730 911 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 SHBGP04278 402 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 FGF1P05230 155 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 EPHX1P07099 455 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 SRFP11831 508 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 HLA-DPA1P20036 260 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 SLC14A2Q15849 920 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 ARMC12Q5T9G4 340 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 UNC5AQ6ZN44 842 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 ADHFE1Q8IWW8 467 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 LRRC39Q96DD0 335 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 TTC25Q96NG3 672 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 ADGRE3Q9BY15 652 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 ARNT2Q9HBZ2 717 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 THEGQ9P2T0 379 aa21.35■■□□□ 1.01
CPNE1-204ENST00000397443 THAP10Q9P2Z0 257 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-204ENST00000397443 A0A0U1RQS6 177 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 AP3B1O00203 1094 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 TRAFD1O14545 582 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-204ENST00000397443 SIN3BO75182 1162 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 EPOP01588 193 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 CTPS1P17812 591 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 HNRNPA1L2Q32P51 320 aaKnown RBP21.34■■□□□ 1.01
CPNE1-204ENST00000397443 ARSIQ5FYB1 569 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 TPRG1Q6ZUI0 275 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 STK40Q8N2I9 435 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 ZNF778Q96MU6 729 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 ZIM3Q96PE6 472 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 HEPHQ9BQS7 1158 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 IL1RAPL1Q9NZN1 696 aa21.34■■□□□ 1.01
CPNE1-204ENST00000397443 ARIH1Q9Y4X5 557 aaPredicted RBP21.34■■□□□ 1.01
CPNE1-204ENST00000397443 LEFTY1O75610 366 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 PGLSO95336 258 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 CTSLP07711 333 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 ZP2Q05996 745 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 GRSF1Q12849 480 aaKnown RBP eCLIP21.33■■□□□ 1.013e-10■□□□□ 10.9
CPNE1-204ENST00000397443 SLC44A4Q53GD3 710 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 FSTL4Q6MZW2 842 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 VOPP1Q96AW1 172 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 KLHL32Q96NJ5 620 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 TMEM245Q9H330 911 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 PLAC1Q9HBJ0 212 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 CA14Q9ULX7 337 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 RPS6KL1Q9Y6S9 549 aa21.33■■□□□ 1.01
CPNE1-204ENST00000397443 MUC22E2RYF6 1773 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-204ENST00000397443 EDDM13A0A1B0GTR0 161 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 BUD23O43709 281 aaKnown RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 PGAM1P18669 254 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 VASPP50552 380 aaPredicted RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 IFFO1Q0D2I5 559 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 LRRC73Q5JTD7 316 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 ZSWIM9Q86XI8 627 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 SUGP1Q8IWZ8 645 aaKnown RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 PPHLN1Q8NEY8 458 aaKnown RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 ZNF669Q96BR6 464 aaPredicted RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 MRRFQ96E11 262 aaKnown RBP21.33■■□□□ 1
CPNE1-204ENST00000397443 MFSD3Q96ES6 412 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 SUV39H2Q9H5I1 410 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 IL36AQ9UHA7 158 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 STON1Q9Y6Q2 735 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 WASF2Q9Y6W5 498 aa21.33■■□□□ 1
CPNE1-204ENST00000397443 SMIM23A6NLE4 172 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 ANKRD66B4E2M5 251 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 SOCS5O75159 536 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 ALPIP09923 528 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 ABL2P42684 1182 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 TNFRSF4P43489 277 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 SEMG2Q02383 582 aa21.32■■□□□ 1
CPNE1-204ENST00000397443 QPCTQ16769 361 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms