RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC17A9Q9BYT1 436 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 SEPT3Q9UH03 358 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 CDC23Q9UJX2 597 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 HS3ST3A1Q9Y663 406 aa14.73□□□□□ -0.05
SEC13-208ENST00000397109 XPAP23025 273 aaPredicted RBP14.72□□□□□ -0.05
SEC13-208ENST00000397109 ABL2P42684 1182 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 GRK6P43250 576 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 RXRGP48443 463 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ARRB1P49407 418 aaPredicted RBP14.72□□□□□ -0.05
SEC13-208ENST00000397109 ARSEP51690 589 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SHC2P98077 582 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SGCGQ13326 291 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 MESDQ14696 234 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 IFI16Q16666 785 aaKnown RBP14.72□□□□□ -0.05
SEC13-208ENST00000397109 PAPD7Q5XG87 772 aaKnown RBP14.72□□□□□ -0.05
SEC13-208ENST00000397109 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SRLQ86TD4 932 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 BBS5Q8N3I7 341 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 KCTD6Q8NC69 237 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 TSEN2Q8NCE0 465 aaKnown RBP14.72□□□□□ -0.05
SEC13-208ENST00000397109 RHBDD1Q8TEB9 315 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 NSMCE1Q8WV22 266 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 VOPP1Q96AW1 172 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 EXOC2Q96KP1 924 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 CAMK1GQ96NX5 476 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ALS2CR12Q96Q35 445 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ZNF670Q9BS34 389 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SUV39H2Q9H5I1 410 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ATP13A3Q9H7F0 1226 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ETNK2Q9NVF9 386 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SALL4Q9UJQ4 1053 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 ANGPTL2Q9UKU9 493 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 PCOLCE2Q9UKZ9 415 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 TFR2Q9UP52 801 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 JRKLQ9Y4A0 524 aa14.72□□□□□ -0.05
SEC13-208ENST00000397109 SPAARA0A1B0GVQ0 90 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 AREL1O15033 823 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 FANCGO15287 622 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 INSIG1O15503 277 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 CBFA2T3O75081 653 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 TRIM16O95361 564 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 TIMP2P16035 220 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 IL4RP24394 825 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 GJC1P36383 396 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
SEC13-208ENST00000397109 ELP6Q0PNE2 266 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 LBRQ14739 615 aaKnown RBP14.71□□□□□ -0.05
SEC13-208ENST00000397109 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 CFAP58Q5T655 872 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 BRAT1Q6PJG6 821 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 ARHGAP36Q6ZRI8 547 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 GLRX5Q86SX6 157 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 DCP2Q8IU60 420 aaKnown RBP14.71□□□□□ -0.05
SEC13-208ENST00000397109 ATPAF2Q8N5M1 289 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 MNS1Q8NEH6 495 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 LENG8Q96PV6 779 aaPredicted RBP14.71□□□□□ -0.05
SEC13-208ENST00000397109 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 C1QTNF2Q9BXJ5 285 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 CALN1Q9BXU9 219 aa14.71□□□□□ -0.05
SEC13-208ENST00000397109 TP53BP1Q12888 1972 aaPredicted RBP14.71□□□□□ -0.05
SEC13-208ENST00000397109 A0A0U1RQJ8 604 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 TSPAN11A1L157 253 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 IGLON5A6NGN9 336 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 MAFKO60675 156 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 PAK4O96013 591 aaPredicted RBP14.7□□□□□ -0.06
SEC13-208ENST00000397109 THEGLP0DJG4 465 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 SERPINA4P29622 427 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 DPYSL3Q14195 570 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 ZNF235Q14590 738 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 ATP13A4Q4VNC1 1196 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 ABI3BPQ7Z7G0 1075 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 SPATS2Q86XZ4 545 aaKnown RBP14.7□□□□□ -0.06
SEC13-208ENST00000397109 TP53INP2Q8IXH6 220 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 DENND6BQ8NEG7 585 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 MYOCQ99972 504 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 C1QTNF7Q9BXJ2 289 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 DUSP10Q9Y6W6 482 aa14.7□□□□□ -0.06
SEC13-208ENST00000397109 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 A6NNZ2 444 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 PIGNO95427 931 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 ITGAVP06756 1048 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CD48P09326 243 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 SLC1A1P43005 524 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 TAS2R40P59535 323 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 AP1S1P61966 158 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FAM193AP78312 1265 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 BCL2L1Q07817 233 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FGL2Q14314 439 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 PAFAH1B3Q15102 231 aaKnown RBP14.69□□□□□ -0.06
SEC13-208ENST00000397109 ANKRD20A8PQ5CZ79 823 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 PRAMEF14Q5SWL7 426 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 C11orf63Q6NUN7 778 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 TPCN2Q8NHX9 752 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 CXorf40AQ8TE69 158 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 ANKRD7Q92527 254 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 FZD3Q9NPG1 666 aa14.69□□□□□ -0.06
SEC13-208ENST00000397109 KLHL11Q9NVR0 708 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms