RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ARRB2P32121 409 aa15.06■□□□□ 0
CBX3-202ENST00000396386 LEPRP48357 1165 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 NUMBP49757 651 aa15.06■□□□□ 0
CBX3-202ENST00000396386 SGSHP51688 502 aa15.06■□□□□ 0
CBX3-202ENST00000396386 EPHB3P54753 998 aa15.06■□□□□ 0
CBX3-202ENST00000396386 TAS2R39P59534 338 aa15.06■□□□□ 0
CBX3-202ENST00000396386 ZNF460Q14592 562 aa15.06■□□□□ 0
CBX3-202ENST00000396386 ADGRF1Q5T601 910 aa15.06■□□□□ 0
CBX3-202ENST00000396386 LIPMQ5VYY2 423 aa15.06■□□□□ 0
CBX3-202ENST00000396386 TMCO2Q7Z6W1 182 aaPredicted RBP15.06■□□□□ 0
CBX3-202ENST00000396386 SETD3Q86TU7 594 aaPredicted RBP15.06■□□□□ 0
CBX3-202ENST00000396386 LONP2Q86WA8 852 aa15.06■□□□□ 0
CBX3-202ENST00000396386 HERC6Q8IVU3 1022 aa15.06■□□□□ 0
CBX3-202ENST00000396386 CEP97Q8IW35 865 aa15.06■□□□□ 0
CBX3-202ENST00000396386 STYXQ8WUJ0 223 aa15.06■□□□□ 0
CBX3-202ENST00000396386 PEX13Q92968 403 aa15.06■□□□□ 0
CBX3-202ENST00000396386 TSPAN17Q96FV3 270 aa15.06■□□□□ 0
CBX3-202ENST00000396386 PSKH2Q96QS6 385 aa15.06■□□□□ 0
CBX3-202ENST00000396386 EBF4Q9BQW3 602 aa15.06■□□□□ 0
CBX3-202ENST00000396386 GKN1Q9NS71 199 aa15.06■□□□□ 0
CBX3-202ENST00000396386 ARMCX1Q9P291 453 aa15.06■□□□□ 0
CBX3-202ENST00000396386 CPSF2Q9P2I0 782 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 AGO1Q9UL18 857 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 RUVBL2Q9Y230 463 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 INSL5Q9Y5Q6 135 aa15.06■□□□□ 0
CBX3-202ENST00000396386 A8MUI8 341 aa15.06■□□□□ 0
CBX3-202ENST00000396386 CHUKO15111 745 aa15.06■□□□□ 0
CBX3-202ENST00000396386 LDB2O43679 373 aa15.06■□□□□ 0
CBX3-202ENST00000396386 EFCAB14O75071 495 aa15.06■□□□□ 0
CBX3-202ENST00000396386 WFS1O76024 890 aa15.06■□□□□ 0
CBX3-202ENST00000396386 KLHL2O95198 593 aa15.06■□□□□ 0
CBX3-202ENST00000396386 NDST3O95803 873 aa15.06■□□□□ 0
CBX3-202ENST00000396386 LATS1O95835 1130 aa15.06■□□□□ 0
CBX3-202ENST00000396386 GLRBP48167 497 aa15.06■□□□□ 0
CBX3-202ENST00000396386 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 ACVR1Q04771 509 aa15.06■□□□□ 0
CBX3-202ENST00000396386 ILF2Q12905 390 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 GALNT3Q14435 633 aa15.06■□□□□ 0
CBX3-202ENST00000396386 RBM20Q5T481 1227 aaKnown RBP15.06■□□□□ 0
CBX3-202ENST00000396386 CNSTQ6PJW8 725 aa15.06■□□□□ 0
CBX3-202ENST00000396386 NAPRTQ6XQN6 538 aa15.06■□□□□ 0
CBX3-202ENST00000396386 TCEAL8Q8IYN2 117 aa15.06■□□□□ 0
CBX3-202ENST00000396386 OR6P1Q8NGX9 317 aa15.06■□□□□ 0
CBX3-202ENST00000396386 MAGEC3Q8TD91 643 aa15.06■□□□□ 0
CBX3-202ENST00000396386 RNF38Q9H0F5 515 aa15.06■□□□□ 0
CBX3-202ENST00000396386 PNPOQ9NVS9 261 aa15.06■□□□□ 0
CBX3-202ENST00000396386 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.06■□□□□ 02e-7■■■□□ 18.1
CBX3-202ENST00000396386 XPR1Q9UBH6 696 aa15.06■□□□□ 0
CBX3-202ENST00000396386 CAPN14A8MX76 684 aa15.05■□□□□ -0
CBX3-202ENST00000396386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.05■□□□□ -0
CBX3-202ENST00000396386 AURKAO14965 403 aa15.05■□□□□ -0
CBX3-202ENST00000396386 TSPAN3O60637 253 aa15.05■□□□□ -0
CBX3-202ENST00000396386 MBL2P11226 248 aaPredicted RBP15.05■□□□□ -0
CBX3-202ENST00000396386 PGGT1BP53609 377 aa15.05■□□□□ -0
CBX3-202ENST00000396386 ALDH18A1P54886 795 aaKnown RBP15.05■□□□□ -0
CBX3-202ENST00000396386 ASPHQ12797 758 aa15.05■□□□□ -0
CBX3-202ENST00000396386 PTAR1Q7Z6K3 402 aaPredicted RBP15.05■□□□□ -0
CBX3-202ENST00000396386 CILP2Q8IUL8 1156 aa15.05■□□□□ -0
CBX3-202ENST00000396386 FSTL5Q8N475 847 aaPredicted RBP15.05■□□□□ -0
CBX3-202ENST00000396386 BLOC1S5Q8TDH9 187 aa15.05■□□□□ -0
CBX3-202ENST00000396386 HDAC10Q969S8 669 aa15.05■□□□□ -0
CBX3-202ENST00000396386 OMDQ99983 421 aa15.05■□□□□ -0
CBX3-202ENST00000396386 GATA5Q9BWX5 397 aaPredicted RBP15.05■□□□□ -0
CBX3-202ENST00000396386 CDH19Q9H159 772 aa15.05■□□□□ -0
CBX3-202ENST00000396386 MAFFQ9ULX9 164 aa15.05■□□□□ -0
CBX3-202ENST00000396386 SORCS3Q9UPU3 1222 aa15.05■□□□□ -0
CBX3-202ENST00000396386 DENND4CQ5VZ89 1909 aa15.04■□□□□ -0
CBX3-202ENST00000396386 SBK3P0C264 359 aa15.04■□□□□ -0
CBX3-202ENST00000396386 GLDCP23378 1020 aa15.04■□□□□ -0
CBX3-202ENST00000396386 SLC8A1P32418 973 aa15.04■□□□□ -0
CBX3-202ENST00000396386 PPM1AP35813 382 aa15.04■□□□□ -0
CBX3-202ENST00000396386 ARSDP51689 593 aa15.04■□□□□ -0
CBX3-202ENST00000396386 MNAT1P51948 309 aa15.04■□□□□ -0
CBX3-202ENST00000396386 CREMQ03060 361 aa15.04■□□□□ -0
CBX3-202ENST00000396386 TUBB3Q13509 450 aa15.04■□□□□ -0
CBX3-202ENST00000396386 ATG14Q6ZNE5 492 aa15.04■□□□□ -0
CBX3-202ENST00000396386 MAVSQ7Z434 540 aa15.04■□□□□ -0
CBX3-202ENST00000396386 DNAJB7Q7Z6W7 309 aaPredicted RBP15.04■□□□□ -0
CBX3-202ENST00000396386 ITIH5Q86UX2 942 aa15.04■□□□□ -0
CBX3-202ENST00000396386 TMEM151AQ8N4L1 468 aa15.04■□□□□ -0
CBX3-202ENST00000396386 TTC8Q8TAM2 541 aa15.04■□□□□ -0
CBX3-202ENST00000396386 AUTS2Q8WXX7 1259 aa15.04■□□□□ -0
CBX3-202ENST00000396386 WBP2Q969T9 261 aa15.04■□□□□ -0
CBX3-202ENST00000396386 NXNL1Q96CM4 212 aa15.04■□□□□ -0
CBX3-202ENST00000396386 GPR78Q96P69 363 aa15.04■□□□□ -0
CBX3-202ENST00000396386 TRIB3Q96RU7 358 aa15.04■□□□□ -0
CBX3-202ENST00000396386 NDNQ99608 321 aa15.04■□□□□ -0
CBX3-202ENST00000396386 MIPEPQ99797 713 aa15.04■□□□□ -0
CBX3-202ENST00000396386 BTBD10Q9BSF8 475 aa15.04■□□□□ -0
CBX3-202ENST00000396386 MUC3BQ9H195 1237 aa15.04■□□□□ -0
CBX3-202ENST00000396386 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
CBX3-202ENST00000396386 TRPC7Q9HCX4 862 aa15.04■□□□□ -0
CBX3-202ENST00000396386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.04■□□□□ -0
CBX3-202ENST00000396386 MRPL17Q9NRX2 175 aaKnown RBP15.04■□□□□ -0
CBX3-202ENST00000396386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.04■□□□□ -0
CBX3-202ENST00000396386 SMPD4Q9NXE4 827 aa15.04■□□□□ -0
CBX3-202ENST00000396386 STOML2Q9UJZ1 356 aa15.04■□□□□ -0
CBX3-202ENST00000396386 RIMKLBQ9ULI2 386 aa15.04■□□□□ -0
CBX3-202ENST00000396386 APOBEC2Q9Y235 224 aaKnown RBP15.04■□□□□ -0
CBX3-202ENST00000396386 TBC1D30Q9Y2I9 924 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms