RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 AGBL5Q8NDL9 886 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 PDXPQ96GD0 296 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC39A1Q9NY26 324 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC12A6Q9UHW9 1150 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 TNRC6AQ8NDV7 1962 aaKnown RBP13.83□□□□□ -0.2
VCPKMT-201ENST00000395859 ABCA2Q9BZC7 2435 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 I6L893 689 aaPredicted RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 POLR2DO15514 142 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 MMP20O60882 483 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 TM7SF2O76062 418 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 DLGAP3O95886 979 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 FURINP09958 794 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC2A3P11169 496 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 KRT13P13646 458 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 TCN2P20062 427 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 BMP6P22004 513 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 GKP32189 559 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CCR1P32246 355 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 GGCXP38435 758 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 RAB15P59190 212 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 YWHAZP63104 245 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 ARF5P84085 180 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 DPYDQ12882 1025 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CBWD6Q4V339 395 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 ZNF805Q5CZA5 627 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CBWD3Q5JTY5 395 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CBWD5Q5RIA9 395 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 DCAF12Q5T6F0 453 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 SPECC1LQ69YQ0 1117 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 ENPP7Q6UWV6 458 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 FAM46DQ8NEK8 389 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 OR4D9Q8NGE8 314 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 KIAA1143Q96AT1 154 aaPredicted RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 TEFMQ96QE5 360 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC4A5Q9BY07 1137 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 PDP2Q9P2J9 529 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 MRPS18BQ9Y676 258 aaKnown RBP13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 DOCK4Q8N1I0 1966 aa13.82□□□□□ -0.2
VCPKMT-201ENST00000395859 K7ELQ4 463 aaPredicted RBP13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 PPP6R2O75170 966 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 CALCAP01258 141 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 RHOCP08134 193 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 BRD2P25440 801 aaKnown RBP13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 CSF2RBP32927 897 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC20A2Q08357 652 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 STILQ15468 1287 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 TAF5Q15542 800 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 KLHL40Q2TBA0 621 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 WSCD2Q2TBF2 565 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 AMZ1Q400G9 498 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 ZC3H18Q86VM9 953 aaKnown RBP13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 ARHGEF26Q96DR7 871 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 MOCOSQ96EN8 888 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 APOOQ9BUR5 198 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 MLXIPLQ9NP71 852 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 ANLNQ9NQW6 1124 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 KLQ9UEF7 1012 aa13.81□□□□□ -0.2
VCPKMT-201ENST00000395859 CXorf51AA0A1B0GTR3 108 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 B4DGG1 531 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 NEMP1O14524 444 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 PAGE1O75459 146 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 RFPL1O75677 317 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 TNFP01375 233 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 TIMP2P16035 220 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 ITIH2P19823 946 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 PDCP20941 246 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 STAT5AP42229 794 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 PMS2P54278 862 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 YWHAEP62258 255 aaKnown RBP13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 AGERQ15109 404 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 NADK2Q4G0N4 442 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM110Q86TL2 294 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 IRF2BP1Q8IU81 584 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 APLFQ8IW19 511 aaPredicted RBP13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 OR7D4Q8NG98 312 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 CCL4L1Q8NHW4 92 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 STK32AQ8WU08 396 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 OR1E3Q8WZA6 343 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 WDR92Q96MX6 357 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 C1QTNF7Q9BXJ2 289 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 ZDHHC6Q9H6R6 413 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
VCPKMT-201ENST00000395859 FCF1Q9Y324 198 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms