RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SLC2A4RGQ9NR83 387 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 HACD3Q9P035 362 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 EVLQ9UI08 416 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 PIAS3Q9Y6X2 628 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 BNIP3LO60238 219 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 USP1O94782 785 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 PAMP19021 973 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GALK1P51570 392 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 CCNHP51946 323 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 ZNF844Q08AG5 666 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 STAT4Q14765 748 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 SIRPB2Q5JXA9 342 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 TRMT11Q7Z4G4 463 aaKnown RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 DSG4Q86SJ6 1040 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 SLC25A41Q8N5S1 370 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 GSDMBQ8TAX9 411 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 HCAR2Q8TDS4 363 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 FRS2Q8WU20 508 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 PDCD6IPQ8WUM4 868 aaKnown RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 SORCS1Q8WY21 1168 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 PEX13Q92968 403 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 THAP10Q9P2Z0 257 aaPredicted RBP13.8□□□□□ -0.2
VAPB-202ENST00000395802 PCDHGC4Q9Y5F7 938 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 EYSQ5T1H1 3165 aa13.8□□□□□ -0.2
VAPB-202ENST00000395802 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 LOC730098B7Z3J9 87 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 HTRA2O43464 458 aaPredicted RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 OPA1O60313 960 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 CRTAMO95727 393 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 PRNPP04156 253 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 HNRNPLP14866 589 aaKnown RBP eCLIP13.79□□□□□ -0.24e-8■■■■□ 19.4
VAPB-202ENST00000395802 CBX1P83916 185 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 MTM1Q13496 603 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 ELAVL3Q14576 367 aaKnown RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 FASTKD3Q14CZ7 662 aaKnown RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 KLHL38Q2WGJ6 581 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 HNRNPA1L2Q32P51 320 aaKnown RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 SPANXN3Q5MJ09 141 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 HP1BP3Q5SSJ5 553 aaPredicted RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 DENND5AQ6IQ26 1287 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 ZNF449Q6P9G9 518 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 DPY19L3Q6ZPD9 716 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 Q6ZVU0 165 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 TMEM135Q86UB9 458 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 ADHFE1Q8IWW8 467 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 OR2A12Q8NGT7 310 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 BRSK1Q8TDC3 778 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 CDKL2Q92772 493 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 MYO19Q96H55 970 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 TRIB3Q96RU7 358 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 KIFC1Q9BW19 673 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 ROPN1BQ9BZX4 212 aaPredicted RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 SUV39H2Q9H5I1 410 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 ROPN1Q9HAT0 212 aaPredicted RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 SYBUQ9NX95 663 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 IL36AQ9UHA7 158 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 PCDHB9Q9Y5E1 797 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
VAPB-202ENST00000395802 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
VAPB-202ENST00000395802 TTC34A8MYJ7 566 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 MAN2B1O00754 1011 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 FZD6O60353 706 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 RNF40O75150 1001 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PGLSO95336 258 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PAPSS2O95340 614 aaPredicted RBP13.78□□□□□ -0.2
VAPB-202ENST00000395802 ATXN1LP0C7T5 689 aaKnown RBP13.78□□□□□ -0.2
VAPB-202ENST00000395802 FRG1Q14331 258 aaKnown RBP13.78□□□□□ -0.2
VAPB-202ENST00000395802 ZNF234Q14588 700 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 POU6F1Q14863 301 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 FBXO43Q4G163 708 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CEP85LQ5SZL2 805 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CERCAMQ5T4B2 595 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PKN3Q6P5Z2 889 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CHFRQ96EP1 664 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 CYTH2Q99418 400 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 TMEM245Q9H330 911 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
VAPB-202ENST00000395802 FETUBQ9UGM5 382 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 KIAA1549LQ6ZVL6 1849 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 C2orf81A6NN90 581 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 BANF1O75531 89 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 GJB3O75712 270 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 SHBGP04278 402 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 IL9P15248 144 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 TPH1P17752 444 aa13.78□□□□□ -0.2
VAPB-202ENST00000395802 SOX9P48436 509 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms