RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SULT2A1Q06520 285 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 PM20D1Q6GTS8 502 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 DENND5AQ6IQ26 1287 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 TRIM67Q6ZTA4 783 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 DRAXINQ8NBI3 349 aaPredicted RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SMG8Q8ND04 991 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 IPMKQ8NFU5 416 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 RAET1EQ8TD07 263 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 HEXDCQ8WVB3 486 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 ELMO2Q96JJ3 720 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 TSPAN18Q96SJ8 248 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 MRPL1Q9BYD6 325 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 PCDHAC1Q9H158 963 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 NCKIPSDQ9NZQ3 722 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 SUCOQ9UBS9 1254 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 CNOT11Q9UKZ1 510 aaKnown RBP18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 FIS1Q9Y3D6 152 aa18.51■□□□□ 0.55
PCDHA1-202ENST00000394633 PTGESO14684 152 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 C8BP07358 591 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 HOXC8P31273 242 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PSMD8P48556 350 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 DNAJB13P59910 316 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF280DQ6N043 979 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 CHSY3Q70JA7 882 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PIWIL4Q7Z3Z4 852 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 SPPL2BQ8TCT7 592 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PCED1BQ96HM7 432 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 MRPL57Q9BQC6 102 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 FICDQ9BVA6 458 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 TNFRSF12AQ9NP84 129 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 DMTF1Q9Y222 760 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 AAR2Q9Y312 384 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 NYNRINQ9P2P1 1898 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 A0A1B0GTW7 788 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 MYBPHLA2RUH7 354 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 C7orf72A4D263 438 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 F9P00740 461 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PENKP01210 267 aaPredicted RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PDAP1Q13442 181 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 TRIM25Q14258 630 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 LRRC23Q53EV4 343 aaPredicted RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 PTAR1Q7Z6K3 402 aaPredicted RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 CHERPQ8IWX8 916 aaKnown RBP18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 RNF217Q8TC41 542 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 KATNAL1Q9BW62 490 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 EPS15L1Q9UBC2 864 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 TCAF1Q9Y4C2 921 aa18.5■□□□□ 0.55
PCDHA1-202ENST00000394633 HHLA1C9JL84 531 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 DFFAO00273 331 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 FBP2O00757 339 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 ATP5F1P24539 256 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF135P52742 658 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 COG7P83436 770 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 LRP8Q14114 963 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 AMIGO2Q86SJ2 522 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 C2CD4AQ8NCU7 369 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 PPHLN1Q8NEY8 458 aaKnown RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 SEMA6AQ9H2E6 1030 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 IGSF5Q9NSI5 407 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 HSFX1Q9UBD0 423 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 PADI4Q9UM07 663 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 PHF24Q9UPV7 400 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 RNF11Q9Y3C5 154 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 AP4S1Q9Y587 144 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 MIA3Q5JRA6 1907 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 A0A087X1B8 175 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 C17orf102A2RUQ5 167 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 TRIM24O15164 1050 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 ASGR1P07306 291 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 HDCP19113 662 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 KCNA5P22460 613 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 NRF1Q16656 503 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 EML3Q32P44 896 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 REP15Q6BDI9 236 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 TAC4Q86UU9 113 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 DDI1Q8WTU0 396 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 EME1Q96AY2 570 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 SENP8Q96LD8 212 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 ZFP42Q96MM3 310 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 FCRL5Q96RD9 977 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 MTG1Q9BT17 334 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 UNC93B1Q9H1C4 597 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 COQ10BQ9H8M1 238 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 GLOD4Q9HC38 313 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 TRPC7Q9HCX4 862 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 CACNA2D2Q9NY47 1150 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 RRN3Q9NYV6 651 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 SARDHQ9UL12 918 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 TMCO1Q9UM00 188 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 NEU3Q9UQ49 428 aa18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 TIMM13Q9Y5L4 95 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 COL4A4P53420 1690 aaPredicted RBP18.49■□□□□ 0.55
PCDHA1-202ENST00000394633 AURKAO14965 403 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 FKTNO75072 461 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 PSMC3P17980 439 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 HOXD10P28358 340 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 CD151P48509 253 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 INHBCP55103 352 aa18.48■□□□□ 0.55
PCDHA1-202ENST00000394633 ZNF33AQ06730 810 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms