RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TAC4Q86UU9 113 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 GPR152Q8TDT2 470 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 ZFAND2BQ8WV99 257 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 C1orf50Q9BV19 199 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 FAM8A1Q9UBU6 413 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 FBXW11Q9UKB1 542 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 TIMM22Q9Y584 194 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 SNX5Q9Y5X3 404 aa16.25■□□□□ 0.19
PCDH1-203ENST00000394536 ZNF189O75820 626 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 CLCNKBP51801 687 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 TSTA3Q13630 321 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 SQLEQ14534 574 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ZRANB3Q5FWF4 1079 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 STXBP5Q5T5C0 1151 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 GPR107Q5VW38 600 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 TIGD7Q6NT04 549 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 OFCC1Q8IZS5 231 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 MIER2Q8N344 545 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ULK4Q96C45 1275 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 HBEGFQ99075 208 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 CCDC28BQ9BUN5 200 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 TRIM8Q9BZR9 551 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 KATNA1O75449 491 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 SMPD1P17405 629 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 PRDX6P30041 224 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 OR1G1P47890 313 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ATP1A4Q13733 1029 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 IMPG1Q17R60 797 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 CYP4V2Q6ZWL3 525 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 STK32CQ86UX6 486 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 CANT1Q8WVQ1 401 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ESAMQ96AP7 390 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 NPY6RQ99463 290 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ZBTB18Q99592 522 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 KCTD14Q9BQ13 255 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 POLR1BQ9H9Y6 1135 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 PGAP2Q9UHJ9 254 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 ORC6Q9Y5N6 252 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 TLL2Q9Y6L7 1015 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 A0A0J9YYE9 177 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 RNASEH2AO75792 299 aaKnown RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 JUNP05412 331 aaKnown RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 FMO4P31512 558 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 SCNN1BP51168 640 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 POU4F1Q01851 419 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 FOXB2Q5VYV0 432 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 DHRSXQ8N5I4 330 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 CNTD1Q8N815 330 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 DQX1Q8TE96 717 aaKnown RBP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCDH1-203ENST00000394536 DMTF1Q9Y222 760 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 NRCAMQ92823 1304 aa16.24■□□□□ 0.19
PCDH1-203ENST00000394536 DHRS12A0PJE2 317 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 MMP3P08254 477 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 ATP6V1B2P21281 511 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-203ENST00000394536 KBTBD6Q86V97 674 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 CAMK1DQ8IU85 385 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 NPWQ8N729 165 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 SEPT5Q99719 369 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-203ENST00000394536 PRKD2Q9BZL6 878 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 TBC1D13Q9NVG8 400 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 A0A087X1B8 175 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 SIX3O95343 332 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-203ENST00000394536 HMOX2P30519 316 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 THPOP40225 353 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 FAM187BQ17R55 369 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 REP15Q6BDI9 236 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 POTEHQ6S545 545 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 FBXO39Q8N4B4 442 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 GIPC2Q8TF65 315 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 EXOC2Q96KP1 924 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 OSBPL11Q9BXB4 747 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 A0A087WXM4 84 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 C1orf232A0A0U1RR37 186 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 G3V2L1 256 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 CLIC3O95833 236 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 OR4Q2P0C623 313 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 CDK18Q07002 472 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 TWF1Q12792 350 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 MGAT5BQ3V5L5 792 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 C17orf80Q9BSJ5 609 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 TRIM62Q9BVG3 475 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 APOL5Q9BWW9 433 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 UNC93B1Q9H1C4 597 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 MRGBPQ9NV56 204 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 UXTQ9UBK9 157 aaPredicted RBP16.23■□□□□ 0.19
PCDH1-203ENST00000394536 NUP205Q92621 2012 aa16.23■□□□□ 0.19
PCDH1-203ENST00000394536 ALDH1A2O94788 518 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 PABPC4LP0CB38 370 aaKnown RBP16.22■□□□□ 0.19
PCDH1-203ENST00000394536 SLC2A3P11169 496 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 FNDC5Q8NAU1 212 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 TBATAQ96M53 351 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 MLPHQ9BV36 600 aaPredicted RBP16.22■□□□□ 0.19
PCDH1-203ENST00000394536 ZBTB26Q9HCK0 441 aa16.22■□□□□ 0.19
PCDH1-203ENST00000394536 MTF2Q9Y483 593 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms