RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 APOC2P02655 101 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 SYPP08247 313 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 PECAM1P16284 738 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 AFF3P51826 1226 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 RPS21P63220 83 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 RACK1P63244 317 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 ELP6Q0PNE2 266 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 TEAD4Q15561 434 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 UGP2Q16851 508 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 KIAA1161Q6NSJ0 714 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 HAUS1Q96CS2 278 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 SERAC1Q96JX3 654 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 NSMCE3Q96MG7 304 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 IL12RB2Q99665 862 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 ORAI3Q9BRQ5 295 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 CAPN10Q9HC96 672 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 SEPT10Q9P0V9 454 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 TTLL3Q9Y4R7 772 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 PCDHGC4Q9Y5F7 938 aa19.17■□□□□ 0.66
PDLIM7-204ENST00000393546 ANKRD36A6QL64 1941 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 UPK3BL1B0FP48 263 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 UPK3BL2E5RIL1 263 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 TRAFD1O14545 582 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 AREL1O15033 823 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 HLA-DQB2P05538 268 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ZNF211Q13398 564 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ZNF284Q2VY69 593 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ALG1LQ6GMV1 187 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 AADACL2Q6P093 401 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ERAP2Q6P179 960 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 B4GALNT4Q76KP1 1039 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 TRIM58Q8NG06 486 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 KLK6Q92876 244 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 SKA1Q96BD8 255 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 AASDHPPTQ9NRN7 309 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 ZFR2Q9UPR6 939 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 TRPM6Q9BX84 2022 aa19.16■□□□□ 0.66
PDLIM7-204ENST00000393546 LNP1A1A4G5 178 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 GOLGA6L9A6NEM1 432 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 HACD1B0YJ81 288 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 PRAMEF26H0Y7S4 382 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ARHGAP33O14559 1287 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SLC31A1O15431 190 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ZSCAN12O43309 604 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 MTSS1O43312 755 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 HTRA2O43464 458 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ENGP17813 658 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ITIH2P19823 946 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 CSNK1EP49674 416 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ATXN3P54252 364 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ZBTB17Q13105 803 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SGCGQ13326 291 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 XRCC4Q13426 336 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 STAT4Q14765 748 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 PRKD1Q15139 912 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 RPS6KA1Q15418 735 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SLC45A4Q5BKX6 768 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 LRRC73Q5JTD7 316 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 MEI1Q5TIA1 1274 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SEL1L3Q68CR1 1132 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 NAPEPLDQ6IQ20 393 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 CXorf40AQ8TE69 158 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 PDCD6IPQ8WUM4 868 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SLC6A18Q96N87 628 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 HERPUD2Q9BSE4 406 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 EDEM2Q9BV94 578 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SLC17A9Q9BYT1 436 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ZDHHC5Q9C0B5 715 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 KCNF1Q9H3M0 494 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 PCDH12Q9NPG4 1184 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 ITM2BQ9Y287 266 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 SLCO1B1Q9Y6L6 691 aa19.15■□□□□ 0.66
PDLIM7-204ENST00000393546 DOCK9Q9BZ29 2069 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 IGLON5A6NGN9 336 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 H7C0C1 242 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 RIOK3O14730 519 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 GDF9O60383 454 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 NFKBIAP25963 317 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 CD38P28907 300 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 ATP5OP48047 213 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 GRIA4P48058 902 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 OTUD4Q01804 1114 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 DSC2Q02487 901 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 NOMO1Q15155 1222 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 TMEM52BQ4KMG9 183 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 TMEM259Q4ZIN3 620 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 TEX44Q53QW1 395 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 ARMC12Q5T9G4 340 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 ZSWIM9Q86XI8 627 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 CNTD1Q8N815 330 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 AGAP3Q96P47 875 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 GTPBP2Q9BX10 602 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 FSCN3Q9NQT6 498 aa19.14■□□□□ 0.65
PDLIM7-204ENST00000393546 RXFP3Q9NSD7 469 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms