RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 TREX1Q9NSU2 369 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 PCMTD2Q9NV79 361 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 NSMCE4AQ9NXX6 385 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.71□□□□□ -1.02
TDP1-203ENST00000393454 CDH22Q9UJ99 828 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 SLC25A13Q9UJS0 675 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 GGA2Q9UJY4 613 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
TDP1-203ENST00000393454 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
TDP1-203ENST00000393454 CCL22O00626 93 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 NDUFAB1O14561 156 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 LINC01565O15544 149 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 SLC4A1P02730 911 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 PDHA1P08559 390 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 VIMP08670 466 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 PABPC1P11940 636 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 TCF3P15923 654 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 ARCN1P48444 511 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 STK19P49842 368 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 PLK1P53350 603 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 SLC18A1P54219 525 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 EPHB1P54762 984 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 PRAMEP78395 509 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 SLC20A2Q08357 652 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 TRAF2Q12933 501 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 CTBP1Q13363 440 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 KCNC3Q14003 757 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 FUT11Q495W5 492 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 RNF43Q68DV7 783 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 TRIM68Q6AZZ1 485 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 KIAA0930Q6ICG6 404 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 LVRNQ6Q4G3 990 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 DENND6AQ8IWF6 608 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 NPAS3Q8IXF0 933 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 TDHQ8IZJ6 230 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 NDUFAF2Q8N183 169 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 EFHBQ8N7U6 833 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 ZNF557Q8N988 423 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 GABPB2Q8TAK5 448 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 BRSK1Q8TDC3 778 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 DENND1AQ8TEH3 1009 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 FGF13Q92913 245 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 RSPRY1Q96DX4 576 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 CHMP6Q96FZ7 201 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 LRRC3BQ96PB8 259 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 CCT8L2Q96SF2 557 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 C12orf65Q9H3J6 166 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 NSUN3Q9H649 340 aaKnown RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 EVLQ9UI08 416 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 ARL5AQ9Y689 179 aa8.7□□□□□ -1.02
TDP1-203ENST00000393454 NUP210Q8TEM1 1887 aaPredicted RBP8.7□□□□□ -1.02
TDP1-203ENST00000393454 WDR91A4D1P6 747 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MROH6A6NGR9 719 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TCP11X1B4DZS4 312 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TPP1O14773 563 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TM9SF1O15321 606 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TIMM44O43615 452 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 LDB2O43679 373 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 PAPSS2O95340 614 aaPredicted RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 CRTAMO95727 393 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 IGSF6O95976 241 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 POLR2EP19388 210 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 SAT1P21673 171 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TYK2P29597 1187 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SLC8A1P32418 973 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ABL2P42684 1182 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 CCT5P48643 541 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 CSE1LP55060 971 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 AP1S1P61966 158 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MPP1Q00013 466 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 BCL2L1Q07817 233 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 HYAL1Q12794 435 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 DNAJC3Q13217 504 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 MSLNQ13421 630 aaPredicted RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 PTPRCAPQ14761 206 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 DHCR24Q15392 516 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 UGP2Q16851 508 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TCEAL5Q5H9L2 206 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ARMC3Q5W041 872 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 ZNF470Q6ECI4 717 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 FSTL4Q6MZW2 842 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 TIFABQ6ZNK6 161 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 EP400NLQ6ZTU2 488 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 PTAR1Q7Z6K3 402 aaPredicted RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 GPR149Q86SP6 731 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 METTL3Q86U44 580 aaKnown RBP8.69□□□□□ -1.02
TDP1-203ENST00000393454 DCLK2Q8N568 766 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 CKAP2Q8WWK9 683 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SMARCD2Q92925 531 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 HDAC10Q969S8 669 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 LMLNQ96KR4 655 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 FAM111AQ96PZ2 611 aa8.69□□□□□ -1.02
TDP1-203ENST00000393454 SRPK1Q96SB4 655 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms