RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 HTRA1Q92743 480 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 PDE4DIPQ5VU43 2346 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SPATA31C2B4DYI2 1134 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SIX3O95343 332 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 PGK1P00558 417 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 IL10P22301 178 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 GABRB3P28472 473 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CDK18Q07002 472 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 HFE2Q6ZVN8 426 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 EPHX4Q8IUS5 362 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 OR52K2Q8NGK3 314 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 HMGCLL1Q8TB92 370 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 HDAC10Q969S8 669 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ESAMQ96AP7 390 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CCDC97Q96F63 343 aaPredicted RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 OSBPL2Q9H1P3 480 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ALG9Q9H6U8 611 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF229Q9UJW7 825 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 GMNNO75496 209 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 HSPA8P11142 646 aaKnown RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 STMN1P16949 149 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ERCC2P18074 760 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 CCNA2P20248 432 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 AKAP5P24588 427 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 PRDX6P30041 224 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 PTPN9P43378 593 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 EFNA5P52803 228 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 TXNL4AP83876 142 aaKnown RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ANKRD26P1Q6NSI1 321 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ZYG11AQ6WRX3 759 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 DHRSXQ8N5I4 330 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 TFAP2CQ92754 450 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 TANKQ92844 425 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 APBB2Q92870 758 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 GFM2Q969S9 779 aaKnown RBP16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NDEL1Q9GZM8 345 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 SIAEQ9HAT2 523 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 NCKIPSDQ9NZQ3 722 aa16.49■□□□□ 0.23
PHTF1-205ENST00000393357 ZBTB17Q13105 803 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 INSCQ1MX18 579 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
PHTF1-205ENST00000393357 DSG4Q86SJ6 1040 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 TMEM110Q86TL2 294 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 RETREG3Q86VR2 466 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 SMG8Q8ND04 991 aaKnown RBP16.48■□□□□ 0.23
PHTF1-205ENST00000393357 RTP4Q96DX8 246 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 C3orf30Q96M34 536 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 MUS81Q96NY9 551 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 FAM49AQ9H0Q0 323 aaPredicted RBP16.48■□□□□ 0.23
PHTF1-205ENST00000393357 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 POU2F3Q9UKI9 436 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 CRYL1Q9Y2S2 319 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 FASP25445 335 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 TNK2Q07912 1038 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 ITKQ08881 620 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 HS3ST5Q8IZT8 346 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 RDM1Q8NG50 284 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 SPPL2BQ8TCT7 592 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 PTPRFP10586 1907 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
PHTF1-205ENST00000393357 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 ANGPT2O15123 496 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 NOBOXO60393 691 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 LINC00032P0C843 101 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
PHTF1-205ENST00000393357 SLC7A1P30825 629 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 PCYT1AP49585 367 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 CLCQ05315 142 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 LAPTM5Q13571 262 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 SPANXN3Q5MJ09 141 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 C6orf10Q5SRN2 563 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 CUZD1Q86UP6 607 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 IGFN1Q86VF2 1251 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 OR2T34Q8NGX1 318 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 OR6P1Q8NGX9 317 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 OR2T3Q8NH03 318 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 CDHR1Q96JP9 859 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 NOL6Q9H6R4 1146 aaKnown RBP16.47■□□□□ 0.23
PHTF1-205ENST00000393357 RAD54BQ9Y620 910 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 U3KQV3 271 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 TMEM114B3SHH9 223 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 SYNCRIPO60506 623 aaKnown RBP16.47■□□□□ 0.23
PHTF1-205ENST00000393357 ARIH2O95376 493 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 PTPN3P26045 913 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 SEPHS1P49903 392 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 TPTEP56180 551 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 ARHGAP36Q6ZRI8 547 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 STK32CQ86UX6 486 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 CAMK1DQ8IU85 385 aa16.47■□□□□ 0.23
PHTF1-205ENST00000393357 SLC35B4Q969S0 331 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms