RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 JUNP05412 331 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PIGGQ5H8A4 983 aa17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OR52K2Q8NGK3 314 aa17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OSCP1Q8WVF1 389 aa17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CCNE2O96020 404 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 GTF2E2P29084 291 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 NAMPTP43490 491 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SEMA5AQ13591 1074 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MEP1AQ16819 746 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CCNYL2Q5T2Q4 361 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 LRRC8DQ7L1W4 858 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ZNF540Q8NDQ6 660 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OR10Q1Q8NGQ4 319 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OLAHQ9NV23 265 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 BOLA1Q9Y3E2 137 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 E7ESA3 106 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OGTO15294 1046 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MED26O95402 600 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 FCGR1AP12314 374 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CXCR3P49682 368 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CLK3P49761 638 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 HK2P52789 917 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MAP3K7CLP57077 242 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MAVSQ7Z434 540 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ATG16L2Q8NAA4 619 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CENPNQ96H22 339 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SMAD5Q99717 465 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 WDR6Q9NNW5 1121 aaKnown RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SEMA4BQ9NPR2 832 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ZNF221Q9UK13 617 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PGLSO95336 258 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TUBA4AP68366 448 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MPP1Q00013 466 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 BTG3Q14201 252 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CNTD1Q8N815 330 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TBC1D15Q8TC07 691 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OLFM1Q99784 485 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TMEM39BQ9GZU3 492 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ERGIC3Q9Y282 383 aa17.1■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ASS1P00966 412 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 UGT2B4P06133 528 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 HPCAL1P37235 193 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TRIP4Q15650 581 aaPredicted RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 AGAP9Q5VTM2 703 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 LDB1Q86U70 411 aaPredicted RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 HORMAD1Q86X24 394 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ANKRD13AQ8IZ07 590 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ABHD11Q8NFV4 315 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MZB1Q8WU39 189 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 TRAPPC12Q8WVT3 735 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SORT1Q99523 831 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 FAM159BA6NKW6 160 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CCL22O00626 93 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 H2AFYO75367 372 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CABYRO75952 493 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 DDX5P17844 614 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ACADVLP49748 655 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 STAT5BP51692 787 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 LAPTM5Q13571 262 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ATF7IP2Q5U623 682 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 NUAK2Q9H093 628 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ITM2BQ9Y287 266 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 AQP9O43315 295 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PRDX6P30041 224 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 FAM98BQ52LJ0 330 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MTERF3Q96E29 417 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SLC45A3Q96JT2 553 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
TRAF3IP1-202ENST00000391993 CDH1P12830 882 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 ADRA2BP18089 450 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PRKCHP24723 683 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SLC25A11Q02978 314 aaKnown RBP17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 SQLEQ14534 574 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 PFKFB4Q16877 469 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 R3HCC1LQ7Z5L2 792 aaKnown RBP17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 OLIG1Q8TAK6 271 aa17.08■□□□□ 0.33
TRAF3IP1-202ENST00000391993 MASTLQ96GX5 879 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms