RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 GLUD1P00367 558 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 DLDP09622 509 aaKnown RBP25.38■■□□□ 1.65
SHOX2-201ENST00000389589 FGF3P11487 239 aaPredicted RBP25.38■■□□□ 1.65
SHOX2-201ENST00000389589 PRAMEP78395 509 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 ARF5P84085 180 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 ACVR1Q04771 509 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 INO80DQ53TQ3 878 aaPredicted RBP25.38■■□□□ 1.65
SHOX2-201ENST00000389589 SPDYAQ5MJ70 313 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 NMRAL1Q9HBL8 299 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 SH3BP1Q9Y3L3 701 aa25.38■■□□□ 1.65
SHOX2-201ENST00000389589 A0A0G2JND7 137 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 SERPINE1P05121 402 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 STMN1P16949 149 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 BMPR1AP36894 532 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 LEPRP48357 1165 aaKnown RBP25.37■■□□□ 1.65
SHOX2-201ENST00000389589 RAB10P61026 200 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 IRF9Q00978 393 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 POU4F1Q01851 419 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 NSUN2Q08J23 767 aaKnown RBP eCLIP25.37■■□□□ 1.65
SHOX2-201ENST00000389589 GALNT3Q14435 633 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 CES4AQ5XG92 561 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 UBE2Q1Q7Z7E8 422 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 SLC41A1Q8IVJ1 513 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 CPXM2Q8N436 756 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 BLOC1S5Q8TDH9 187 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 SREK1Q8WXA9 508 aaKnown RBP25.37■■□□□ 1.65
SHOX2-201ENST00000389589 FEM1AQ9BSK4 669 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 MYLK2Q9H1R3 596 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 ASAH2Q9NR71 780 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 ZNF358Q9NW07 568 aa25.37■■□□□ 1.65
SHOX2-201ENST00000389589 E2F8A0AVK6 867 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 ZMPSTE24O75844 475 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 KCNA4P22459 653 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 RGRP47804 291 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 CDH18Q13634 790 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 C10orf107Q8IVU9 208 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 PHOSPHO2Q8TCD6 241 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 ERP27Q96DN0 273 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 KCNK13Q9HB14 408 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 ACOT9Q9Y305 439 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 SLC4A7Q9Y6M7 1214 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 SAT1P21673 171 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 CTNNB1P35222 781 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 SKIV2L2P42285 1042 aaKnown RBP25.36■■□□□ 1.65
SHOX2-201ENST00000389589 CLCN5P51795 746 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 ERVFC1P60507 584 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 FSCBQ5H9T9 825 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 RTL10Q7L3V2 364 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 OR6P1Q8NGX9 317 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 RDH11Q8TC12 318 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 HDAC10Q969S8 669 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 ELMO2Q96JJ3 720 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 RASSF4Q9H2L5 321 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 KCNK4Q9NYG8 393 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 CFAP97Q9P2B7 532 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 VPS28Q9UK41 221 aa25.36■■□□□ 1.65
SHOX2-201ENST00000389589 TLL1O43897 1013 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 HAUS5O94927 633 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 SLC35E2BP0CK96 405 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 ZCCHC23Q6ZST2 131 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 CILP2Q8IUL8 1156 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 MRPL43Q8N983 215 aaKnown RBP25.35■■□□□ 1.65
SHOX2-201ENST00000389589 C1QTNF1Q9BXJ1 281 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 TMEM120AQ9BXJ8 343 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 ECT2Q9H8V3 914 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 OR51B4Q9Y5P0 310 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 C2orf71A6NGG8 1288 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 ATP5HO75947 161 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 TMCC1O94876 653 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 CRTAMO95727 393 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 RALBP11234 206 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 MZF1P28698 734 aaPredicted RBP25.35■■□□□ 1.65
SHOX2-201ENST00000389589 GMPRP36959 345 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 SLC12A2P55011 1212 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 PPM1LQ5SGD2 360 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 MPP7Q5T2T1 576 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 STYXQ8WUJ0 223 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 HERVK_113Q902F9 699 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 CORO1BQ9BR76 489 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 SIKE1Q9BRV8 207 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 TDRD1Q9BXT4 1180 aaKnown RBP25.35■■□□□ 1.65
SHOX2-201ENST00000389589 FBXO6Q9NRD1 293 aaPredicted RBP25.35■■□□□ 1.65
SHOX2-201ENST00000389589 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.35■■□□□ 1.65
SHOX2-201ENST00000389589 RWDD3Q9Y3V2 267 aa25.35■■□□□ 1.65
SHOX2-201ENST00000389589 A0A087X1B8 175 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 A0A1W2PRU2 124 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 SCAMP3O14828 347 aaKnown RBP25.34■■□□□ 1.65
SHOX2-201ENST00000389589 PHGDHO43175 533 aaKnown RBP25.34■■□□□ 1.65
SHOX2-201ENST00000389589 H2AFYO75367 372 aaKnown RBP25.34■■□□□ 1.65
SHOX2-201ENST00000389589 FGF19O95750 216 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 CD160O95971 181 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 MYL4P12829 197 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 SLC1A6P48664 564 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 RALGPS1Q5JS13 557 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 GPATCH11Q8N954 259 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 DCAF4L2Q8NA75 395 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 TDRD5Q8NAT2 981 aaKnown RBP25.34■■□□□ 1.65
SHOX2-201ENST00000389589 EXOC2Q96KP1 924 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 TASP1Q9H6P5 420 aa25.34■■□□□ 1.65
SHOX2-201ENST00000389589 TXLNGQ9NUQ3 528 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms