RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CASTOR2A6NHX0 329 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 AGRPO00253 132 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 MATN2O00339 956 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ENDOD1O94919 500 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 XPAP23025 273 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ADORA2AP29274 412 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 RENBPP51606 427 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 PAGE2BQ5JRK9 111 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 C10orf120Q5SQS8 335 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 EPGNQ6UW88 154 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 POC5Q8NA72 575 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 SEPT8Q92599 483 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 EPS8L2Q9H6S3 715 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 PDGFCQ9NRA1 345 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 U3KQV3 271 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TOR1BO14657 336 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 MYO1DO94832 1006 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ITGB6P18564 788 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 L1CAMP32004 1257 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ADRA1BP35368 520 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 KIAA1841Q6NSI8 718 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ESRP1Q6NXG1 681 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 CRTC3Q6UUV7 619 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 IL27RAQ6UWB1 636 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 RALGPS2Q86X27 583 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 SMPD3Q9NY59 655 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TAS2R13Q9NYV9 303 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 AKAP11Q9UKA4 1901 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 CCL22O00626 93 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ATG7O95352 703 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 ALDOAP04075 364 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TAS2R39P59534 338 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 GNA12Q03113 381 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 PPIL2Q13356 520 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 GRIK4Q16099 956 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 MILR1Q7Z6M3 343 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 STRA6Q9BX79 667 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TPRKBQ9Y3C4 175 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
TRAPPC9-201ENST00000389328 C2orf81A6NN90 581 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CLIC3O95833 236 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 MT-CYBP00156 380 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UGT1A6P19224 532 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HLA-DPA1P20036 260 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UGT1A1P22309 533 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UGT1A4P22310 534 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UGT1A3P35503 534 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 UGT1A5P35504 534 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CD86P42081 329 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 RPS9P46781 194 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 ADGRG6Q86SQ4 1221 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CDYL2Q8N8U2 506 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 C19orf60Q96EN9 201 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 OXSMQ9NWU1 459 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 LEF1Q9UJU2 399 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 VWA7Q9Y334 891 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 MFHAS1Q9Y4C4 1052 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 TRIM43BA6NCK2 446 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 MAGEB3O15480 346 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 POU1F1P28069 291 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 ADSLP30566 484 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 CLCN5P51795 746 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 EFEMP1Q12805 493 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 TMEM214Q6NUQ4 689 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 DCBLD1Q8N8Z6 715 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HDAC10Q969S8 669 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 PPM1MQ96MI6 270 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 H2AFJQ9BTM1 129 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 TMEM161AQ9NX61 479 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 TUBGCP4Q9UGJ1 667 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 EI24O14681 340 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 PGGT1BP53609 377 aa13.21□□□□□ -0.29
TRAPPC9-201ENST00000389328 ENPEPQ07075 957 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms