RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TRPM8Q7Z2W7 1104 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 C7orf61Q8IZ16 206 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEC13-203ENST00000383801 ARMC2Q8NEN0 867 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 MICAL1Q8TDZ2 1067 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TDRD1Q9BXT4 1180 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 TRIM55Q9BYV6 548 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 NOD2Q9HC29 1040 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.67□□□□□ -0.224e-32■■■■□ 25.9
SEC13-203ENST00000383801 CFAP97Q9P2B7 532 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 RPL26L1Q9UNX3 145 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 MTO1Q9Y2Z2 717 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 A0A096LPK6 155 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 C2orf81A6NN90 581 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 DCTN3O75935 186 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 CD160O95971 181 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 C2P06681 752 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SCNN1BP51168 640 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CLCN5P51795 746 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 PRAMEP78395 509 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SEPT6Q14141 434 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 DMC1Q14565 340 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 IHHQ14623 411 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TAF1AQ15573 450 aaPredicted RBP13.67□□□□□ -0.22
SEC13-203ENST00000383801 TSNAXIP1Q2TAA8 658 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 NCEH1Q6PIU2 408 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 OTOAQ7RTW8 1153 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 OR13J1Q8NGT2 312 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 SLC22A17Q8WUG5 538 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TSPAN17Q96FV3 270 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 TCF12Q99081 682 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 FAM96AQ9H5X1 160 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
SEC13-203ENST00000383801 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 A0A087X1B8 175 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 PFDN6O15212 129 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 CCL16O15467 120 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 TMCC1O94876 653 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 STMN1P16949 149 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 OGNP20774 298 aaKnown RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 RAB10P61026 200 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 USP10Q14694 798 aaKnown RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 GRM3Q14832 879 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 GPR158Q5T848 1215 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 N4BP2L1Q5TBK1 243 aaPredicted RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 CGB2Q6NT52 195 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 KDELC2Q7Z4H8 507 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 SDCCAG8Q86SQ7 713 aaPredicted RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 SHKBP1Q8TBC3 707 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 ISG20Q96AZ6 181 aaKnown RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 LMAN2LQ9H0V9 348 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 MAN1C1Q9NR34 630 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 TDP1Q9NUW8 608 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 NLE1Q9NVX2 485 aaPredicted RBP13.66□□□□□ -0.22
SEC13-203ENST00000383801 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 ACOT9Q9Y305 439 aa13.66□□□□□ -0.22
SEC13-203ENST00000383801 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 ANKRD66B4E2M5 251 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
SEC13-203ENST00000383801 SOCS5O75159 536 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SNNO75324 88 aaPredicted RBP13.65□□□□□ -0.22
SEC13-203ENST00000383801 RPP40O75818 363 aaKnown RBP13.65□□□□□ -0.22
SEC13-203ENST00000383801 ATP5HO75947 161 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 GLP2RO95838 553 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 PROCP04070 461 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 RHOP08100 348 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 GABRB3P28472 473 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 MZF1P28698 734 aaPredicted RBP13.65□□□□□ -0.22
SEC13-203ENST00000383801 CSKP41240 450 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SLC12A2P55011 1212 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 ERVK-21P61565 698 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 RHOAP61586 193 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SULT2A1Q06520 285 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 ASPHQ12797 758 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SETDB1Q15047 1291 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 FSCBQ5H9T9 825 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 CILP2Q8IUL8 1156 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 BBS7Q8IWZ6 715 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SH3RF2Q8TEC5 729 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SLC2A11Q9BYW1 496 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 NMRAL1Q9HBL8 299 aa13.65□□□□□ -0.22
SEC13-203ENST00000383801 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms