RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 MTF2Q9Y483 593 aaPredicted RBP5.9□□□□□ -1.46
RFX3-204ENST00000382004 SLC37A4O43826 429 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 THRBP10828 461 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLC25A3Q00325 362 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 BTG3Q14201 252 aaPredicted RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 RASAL3Q86YV0 1011 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 HNRNPLLQ8WVV9 542 aaKnown RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 CHCHD6Q9BRQ6 235 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 TKTL2Q9H0I9 626 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 RAPGEFL1Q9UHV5 662 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 MID1O15344 667 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLC7A2P52569 658 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 CRY2Q49AN0 593 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SATL1Q86VE3 508 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 AMIGO1Q86WK6 493 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 WDR49Q8IV35 697 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 PIK3C3Q8NEB9 887 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D16Q8TBP0 767 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 KAT2AQ92830 837 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 RELTQ969Z4 430 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 NDNQ99608 321 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 FDXACB1Q9BRP7 624 aaPredicted RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 CCDC28BQ9BUN5 200 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 OSBPL11Q9BXB4 747 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 RSL24D1Q9UHA3 163 aaKnown RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 PNPLA7Q6ZV29 1317 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 CPSF4LA6NMK7 179 aaKnown RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 XYLBO75191 536 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 MATN4O95460 622 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 LSM8O95777 96 aaKnown RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 NELFEP18615 380 aaKnown RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 ECHS1P30084 290 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 TTKP33981 857 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 NOS2P35228 1153 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 AP2S1P53680 142 aaPredicted RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 IFI35P80217 286 aaPredicted RBP5.9□□□□□ -1.47
RFX3-204ENST00000382004 SQLEQ14534 574 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 GFOD2Q3B7J2 385 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLC39A12Q504Y0 691 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLC45A4Q5BKX6 768 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 ZNF730Q6ZMV8 503 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SMIM5Q71RC9 77 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 AMIGO2Q86SJ2 522 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLCO6A1Q86UG4 719 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 DENND6BQ8NEG7 585 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 POF1BQ8WVV4 589 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 ART5Q96L15 291 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 PANX1Q96RD7 426 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SP140LQ9H930 580 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 MYOZ2Q9NPC6 264 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 U3KQV3 271 aa5.9□□□□□ -1.47
RFX3-204ENST00000382004 SLC28A1O00337 649 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 HCN1O60741 890 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SERPINB7O75635 380 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CCNKO75909 580 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 NADKO95544 446 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SUPT20HL2P0C7V6 817 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LINC00032P0C843 101 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SAGP10523 405 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 HSD3B1P14060 373 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ETS2P15036 469 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ATP4AP20648 1035 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 BDNFP23560 247 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CD86P42081 329 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ABL2P42684 1182 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 RPL21P46778 160 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 GJA8P48165 433 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 SEPHS1P49903 392 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MANFP55145 182 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 MCL1Q07820 350 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TBC1D25Q3MII6 688 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 STXBP5Q5T5C0 1151 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MCFD2Q8NI22 146 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 DNAJB3Q8WWF6 145 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ABCG4Q9H172 646 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ALDH8A1Q9H2A2 487 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TMEM39AQ9NV64 488 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 NYAP2Q9P242 653 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 EGFL7Q9UHF1 273 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 LEF1Q9UJU2 399 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 BARX2Q9UMQ3 279 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 DGKBQ9Y6T7 804 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZSCAN5CA6NGD5 496 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 TRIM64BA6NI03 449 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 MAN2A2P49641 1150 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 CDK7P50613 346 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TSPAN5P62079 268 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 OGFRL1Q5TC84 451 aaPredicted RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 SLC30A6Q6NXT4 461 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 PLET1Q6UQ28 207 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZNF567Q8N184 647 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TAS1R2Q8TE23 839 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 TATDN2Q93075 761 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 ZSCAN5AQ9BUG6 496 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 POLR1EQ9GZS1 481 aaKnown RBP5.89□□□□□ -1.47
RFX3-204ENST00000382004 TMLHEQ9NVH6 421 aa5.89□□□□□ -1.47
RFX3-204ENST00000382004 HPF1Q9NWY4 346 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms