RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 BLOC1S5Q8TDH9 187 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 PTPRN2Q92932 1015 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 C2orf49Q9BVC5 232 aaPredicted RBP17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 CAB39LQ9H9S4 337 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 SLCO1B3Q9NPD5 702 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 INTS6Q9UL03 887 aaKnown RBP17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 PCDHGC4Q9Y5F7 938 aa17.49■□□□□ 0.39
THUMPD2-201ENST00000378727 TRANK1O15050 2925 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CEP290O15078 2479 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 TIMM44O43615 452 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 PDHA1P08559 390 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 POU2F2P09086 479 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 TYK2P29597 1187 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SERPINB4P48594 390 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 NSUN2Q08J23 767 aaKnown RBP eCLIP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ZNF77Q15935 545 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 NEPROQ6NW34 567 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 NCEH1Q6PIU2 408 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 FAM47EQ6ZV65 393 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CACNA2D3Q8IZS8 1091 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 C2CD4AQ8NCU7 369 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 LRRC8CQ8TDW0 803 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ING5Q8WYH8 240 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 RHOJQ9H4E5 214 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 KIAA1522Q9P206 1035 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 RAI2Q9Y5P3 530 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ARL5AQ9Y689 179 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CCL22O00626 93 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SMAD6O43541 496 aaKnown RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SNX3O60493 162 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CYBBP04839 570 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SERPINB8P50452 374 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 RHOAP61586 193 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 TRAF2Q12933 501 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CBX2Q14781 532 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 GRM3Q14832 879 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 DLG2Q15700 870 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 PLEKHG6Q3KR16 790 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ATXN7L2Q5T6C5 722 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ZNF470Q6ECI4 717 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 NLRP9Q7RTR0 991 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 C12orf76Q8N812 135 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ARMC2Q8NEN0 867 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 BRSK1Q8TDC3 778 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SMIM14Q96QK8 99 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 GPR22Q99680 433 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 EMCNQ9ULC0 261 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 ARIH1Q9Y4X5 557 aaPredicted RBP17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 SPO11Q9Y5K1 396 aa17.48■□□□□ 0.39
THUMPD2-201ENST00000378727 CSRP3P50461 194 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 PLK1P53350 603 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 ACVR1Q04771 509 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 USP4Q13107 963 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 PTPRCAPQ14761 206 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 C6orf89Q6UWU4 347 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 ACDQ96AP0 544 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 PBX4Q9BYU1 374 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 LINC00597Q9H2U6 94 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 DPP7Q9UHL4 492 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 FBXO5Q9UKT4 447 aa17.47■□□□□ 0.39
THUMPD2-201ENST00000378727 BUD23O43709 281 aaKnown RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 PENKP01210 267 aaPredicted RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 HLA-FP30511 346 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 ASTLQ6HA08 431 aaPredicted RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 RETSATQ6NUM9 610 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 ARID3BQ8IVW6 561 aaPredicted RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 MFSD6LQ8IWD5 586 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 ITFG1Q8TB96 612 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 HDAC10Q969S8 669 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 RMDN1Q96DB5 314 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 TLE6Q9H808 572 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 MANSC1Q9H8J5 431 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 AURKAO14965 403 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 SLC7A4O43246 635 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 EDF1O60869 148 aaKnown RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 GLRA3O75311 464 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 UGP2Q16851 508 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 C16orf46Q6P387 395 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 PNPLA1Q8N8W4 532 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 LPCAT1Q8NF37 534 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 VN1R2Q8NFZ6 395 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 MECRQ9BV79 373 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 ABCB8Q9NUT2 735 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 DCDC2Q9UHG0 476 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 SLC39A10Q9ULF5 831 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 PHTF1Q9UMS5 762 aa17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 MRPS23Q9Y3D9 190 aaKnown RBP17.46■□□□□ 0.39
THUMPD2-201ENST00000378727 C2orf16Q68DN1 1984 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 OR51F1A6NGY5 319 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 ZNF197O14709 1029 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 GSRP00390 522 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 BGNP21810 368 aa17.45■□□□□ 0.38
THUMPD2-201ENST00000378727 NRIP1P48552 1158 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms